Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
27
candidate regulatory elements
15
target gene predictions
8
binding sites
7
histone modifications
5
accessible chromatin
1
eQTL
1
gene expression
1
variant allelic effects
Date released
29
February, 2021
26
September, 2022
5
June, 2020
2
May, 2021
1
February, 2024
1
January, 2022
1
March, 2024
Available data
63
bed bed3+
bed bed9
1
tsv
Organism
65
Homo sapiens
Biosample type
44
cell line
13
tissue
8
primary cell
Organ
772
epithelium
572
kidney
400
brain
367
connective tissue
293
musculature of body
246
pancreas
232
lung
228
vasculature
215
intestine
199
heart
194
limb
193
bodily fluid
186
embryo
184
blood
174
blood vessel
160
skin of body
137
liver
135
large intestine
110
extraembryonic component
96
eye
87
stomach
81
adipose tissue
77
uterus
74
bone element
67
artery
67
mammary gland
65
prostate gland
61
small intestine
55
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
40
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
22
testis
21
nerve
19
lymphoid tissue
19
vein
17
ovary
17
thyroid gland
16
lymphatic vessel
15
mouth
15
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
65
AMP
Genome assembly (visualization)
63
hg19
1
GRCh38
month_released!
November, 2021
files.file_type!
bed bed9
BIOSAMPLE
TYPE
65 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
cell line
22Rv1
4
2
1
1
LNCAP
2
1
1
1
1
PC-3
2
1
1
1
1
RWPE1
2
1
1
1
1
LNCaP clone FGC
3
2
+ See 5 more…
tissue
prostate gland
4
2
2
2
1
1
prostate
1
primary cell
epithelial cell of prostate
4
3
luminal epithelial cell of prostatic duct
1
See all biosamples
Download