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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
gene expression
182
candidate regulatory elements
95
target gene predictions
94
chromatin state
64
accessible chromatin
60
differential activity
20
binding sites
20
histone modifications
12
eQTL
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
271
September, 2022
214
February, 2021
140
September, 2023
38
August, 2021
30
February, 2024
May, 2020
20
June, 2020
17
January, 2020
13
March, 2020
11
February, 2020
November, 2021
4
March, 2023
3
August, 2017
3
May, 2021
3
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
386
bed bed3+
279
tsv
91
bed bed9
87
txt
49
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
778
Homo sapiens
Biosample type
355
primary cell
347
tissue
68
cell line
8
in vitro differentiated cells
Organ
807
epithelium
630
kidney
447
brain
400
connective tissue
359
musculature of body
302
lung
270
intestine
253
pancreas
245
vasculature
234
heart
234
limb
218
bodily fluid
213
embryo
207
blood
194
skin of body
190
blood vessel
168
large intestine
148
liver
143
extraembryonic component
110
stomach
103
eye
87
bone element
86
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
63
adrenal gland
62
lymph node
61
ureter
48
gonad
47
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
24
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
21
vein
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
638
AMP
140
KPMP
Genome assembly (visualization)
487
hg19
154
GRCh38
2
hg18
month_released!
November, 2021
May, 2020
BIOSAMPLE
TYPE
778 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
variant allelic effects
primary cell
hepatocyte
13
1
2
1
7
1
4
1
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
endothelial cell of hepatic sinusoid
4
4
6
glomerular visceral epithelial cell
5
2
1
1
2
+ See 65 more…
tissue
kidney
7
29
14
16
10
1
2
1
liver
1
13
10
9
4
1
1
2
7
1
right kidney
20
10
10
renal cortex interstitium
20
9
9
1
renal pelvis
19
9
9
2
+ See 16 more…
cell line
HepG2
2
3
2
2
3
5
HEK293
3
1
1
1
2
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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