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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
839
candidate regulatory elements
726
binding sites
685
accessible chromatin
683
gene expression
412
target gene predictions
169
eQTL
167
differential activity
137
variant allelic effects
111
chromatin state
74
Fine-mapped variants
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3811
bed bed3+
898
tsv
320
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
4956
Homo sapiens
Biosample type
1740
cell line
1618
primary cell
1275
tissue
365
in vitro differentiated cells
4
stem cell
Organ
665
epithelium
422
kidney
280
brain
276
connective tissue
215
pancreas
181
vasculature
157
musculature of body
139
blood vessel
137
heart
131
embryo
124
bodily fluid
119
blood
106
limb
105
intestine
104
liver
88
lung
88
skin of body
76
eye
69
large intestine
68
uterus
65
adipose tissue
53
artery
45
bone element
43
extraembryonic component
41
stomach
39
prostate gland
36
lymph node
36
mammary gland
32
penis
25
ureter
23
gonad
23
small intestine
22
placenta
21
adrenal gland
20
esophagus
18
spinal cord
16
nerve
16
spleen
16
vein
15
thymus
13
pituitary gland
13
testis
12
lymphatic vessel
9
bone marrow
9
lymphoid tissue
9
ovary
9
skeleton
9
thyroid gland
8
bronchus
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4632
AMP
281
KPMP
58
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4021
hg19
697
GRCh38
4
hg18
month_released!
November, 2021
September, 2022
October, 2022
BIOSAMPLE
TYPE
5004 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
accessible chromatin
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
2
52
H1-hESC
1
1
1
8
38
EndoC_BH1
1
1
8
8
1
3
1
K562
1
1
1
1
17
1
breast cancer cell
11
9
+ See 744 more…
primary cell
monocyte
86
1
18
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
3
3
4
1
hepatocyte
4
1
7
13
1
2
endothelial cell
1
2
5
9
1
1
2
1
CD14-positive monocyte
4
15
+ See 381 more…
tissue
islet of Langerhans
1
2
5
11
1
13
1
3
2
2
2
kidney
2
15
1
10
7
1
1
2
heart
1
18
1
5
3
1
2
2
retina
1
3
1
23
1
1
1
stomach
1
21
3
1
2
1
+ See 257 more…
in vitro differentiated cells
neural progenitor cell
15
1
10
7
1
adipocyte
1
2
1
4
1
4
4
embryonic stem cell
1
1
6
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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