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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
212
candidate regulatory elements
144
accessible chromatin
137
target gene predictions
111
chromatin state
92
differential activity
49
binding sites
41
variant allelic effects
34
histone modifications
6
eQTL
2
caQTL
Date released
312
September, 2022
265
February, 2021
155
September, 2023
November, 2021
79
February, 2024
40
May, 2021
38
March, 2023
35
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
March, 2020
7
April, 2020
7
August, 2017
7
October, 2022
6
August, 2018
5
March, 2024
5
October, 2019
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
622
bed bed3+
327
tsv
104
bed bed9
98
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1084
Homo sapiens
Biosample type
692
primary cell
292
tissue
74
cell line
26
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
900
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
729
hg19
166
GRCh38
month_released!
November, 2021
BIOSAMPLE
TYPE
1084 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
hepatocyte
13
1
7
2
1
1
2
4
endothelial cell
9
5
1
2
2
1
1
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 122 more…
tissue
small intestine
29
1
17
15
1
large intestine
27
1
14
13
1
sigmoid colon
10
1
7
5
pigmented layer of retina
20
transverse colon
8
1
5
4
1
+ See 34 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
2
1
2
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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