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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
candidate regulatory elements
36
target gene predictions
34
accessible chromatin
32
chromatin state
28
gene expression
21
binding sites
20
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
88
September, 2022
62
February, 2021
29
February, 2024
10
August, 2021
10
June, 2020
10
March, 2020
November, 2021
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
2
January, 2021
2
October, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
165
bed bed3+
32
tsv
28
bed bed9
28
bigWig
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
239
Homo sapiens
Biosample type
81
cell line
80
tissue
71
primary cell
7
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
408
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
237
AMP
2
T1D
Genome assembly (visualization)
203
hg19
77
GRCh38
2
hg18
month_released!
November, 2021
BIOSAMPLE
TYPE
239 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
HepG2
2
3
2
2
3
5
MG63
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
OCI-LY1
2
1
1
1
1
SJSA1
2
1
1
1
1
+ See 10 more…
tissue
liver
13
10
4
9
1
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
bone tissue
4
femur
2
1
1
arm bone
1
1
1
+ See 9 more…
primary cell
hepatocyte
1
2
7
1
13
1
4
2
endothelial cell of hepatic sinusoid
4
4
6
hepatic stellate cell
1
1
2
1
1
1
1
pancreatic endothelial cell
1
3
stromal cell of bone marrow
2
1
1
+ See 6 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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