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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
candidate regulatory elements
69
target gene predictions
58
accessible chromatin
56
chromatin state
50
gene expression
33
binding sites
25
histone modifications
23
eQTL
16
variant allelic effects
14
differential activity
9
Fine-mapped variants
2
caQTL
2
pQTL
Date released
144
September, 2022
118
February, 2021
November, 2021
22
June, 2020
18
February, 2024
17
May, 2021
17
September, 2023
13
October, 2022
12
March, 2020
11
August, 2021
11
January, 2020
10
February, 2020
10
May, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
309
bed bed3+
70
tsv
49
bed bed9
23
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
453
Homo sapiens
Biosample type
237
primary cell
131
tissue
50
in vitro differentiated cells
34
cell line
1
stem cell
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
427
AMP
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
378
hg19
85
GRCh38
2
hg18
month_released!
November, 2021
BIOSAMPLE
TYPE
453 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast of dermis
4
4
3
1
fibroblast
2
1
2
6
+ See 43 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
spinal cord
14
8
1
7
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
spinal cord
1
2
+ See 8 more…
stem cell
mesenchymal stem cell
1
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