Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
126
target gene predictions
72
candidate regulatory elements
50
binding sites
40
chromatin state
27
histone modifications
15
accessible chromatin
3
eQTL
3
gene expression
Date released
114
September, 2022
91
February, 2021
79
February, 2024
20
October, 2022
15
June, 2020
7
May, 2021
3
March, 2024
November, 2021
2
August, 2017
2
August, 2021
1
January, 2022
1
March, 2020
1
May, 2020
Available data
292
bed bed3+
38
bed bed9
3
tsv
Organism
336
Homo sapiens
Biosample type
260
cell line
64
tissue
12
primary cell
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
336
AMP
Genome assembly (visualization)
332
hg19
118
GRCh38
month_released!
November, 2021
BIOSAMPLE
TYPE
336 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
HeLa-S3
55
5
1
3
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
+ See 25 more…
tissue
thymus
14
20
1
11
1
1
uterus
2
3
1
1
1
1
blood
2
endometrium cancer
1
1
cervix - ectocervix
1
+ See 2 more…
primary cell
peripheral blood mononuclear cell
4
1
1
Ishikawa
1
1
1
peripheral blood stem cell
1
1
1
See all biosamples
Download