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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
target gene predictions
71
accessible chromatin
71
candidate regulatory elements
51
binding sites
49
gene expression
44
chromatin state
33
differential activity
31
histone modifications
17
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
1
pQTL
Date released
119
September, 2022
105
February, 2021
53
February, 2024
47
March, 2023
37
May, 2021
20
January, 2021
19
October, 2022
18
November, 2021
16
June, 2020
11
August, 2021
9
March, 2020
7
August, 2018
6
May, 2020
October, 2019
5
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
343
bed bed3+
77
tsv
51
bigWig
38
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
489
Homo sapiens
Biosample type
239
cell line
130
primary cell
117
tissue
3
in vitro differentiated cells
Organ
944
epithelium
652
kidney
466
brain
456
connective tissue
374
musculature of body
311
lung
289
intestine
271
pancreas
264
vasculature
253
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
202
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
449
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
397
hg19
108
GRCh38
month_released!
October, 2019
BIOSAMPLE
TYPE
489 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
gene expression
chromatin state
differential activity
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
pQTL
cell line
K562
23
1
7
2
7
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
2
1
1
2
1
1
+ See 32 more…
primary cell
pancreatic ductal cell
3
5
1
3
3
2
1
pancreatic alpha cell
3
6
3
3
1
pancreatic beta cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
pancreatic acinar cell
3
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
2
11
3
1
13
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
4
5
1
3
1
1
1
endocrine pancreas
4
7
4
blood
2
+ See 9 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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