Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
21
candidate regulatory elements
21
gene expression
20
target gene predictions
16
chromatin state
14
histone modifications
12
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
43
September, 2022
26
February, 2024
25
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
October, 2022
1
September, 2018
Available data
97
bed bed3+
25
tsv
23
bigWig
13
bed bed9
1
bam
1
bigBed bed9
Organism
148
Homo sapiens
Biosample type
63
primary cell
58
tissue
27
cell line
in vitro differentiated cells
Organ
917
epithelium
649
kidney
456
brain
396
connective tissue
370
musculature of body
307
lung
288
intestine
274
pancreas
260
vasculature
254
heart
244
limb
202
blood vessel
199
bodily fluid
191
skin of body
188
blood
184
embryo
173
large intestine
148
liver
140
extraembryonic component
119
stomach
101
eye
88
adipose tissue
88
bone element
84
small intestine
82
uterus
81
mammary gland
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
60
lymph node
56
penis
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
143
AMP
5
ENCODE
Genome assembly (visualization)
119
hg19
59
GRCh38
2
hg18
month_released!
October, 2022
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
148 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
13
3
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
1
10
9
2
1
7
1
1
right lobe of liver
2
1
1
1
1
3
cell line
HepG2
2
2
3
2
5
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
Download