Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1355
target gene predictions
862
accessible chromatin
834
candidate regulatory elements
120
histone modifications
120
variant allelic effects
40
chromatin state
8
eQTL
7
binding sites
6
caQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
Date released
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
October, 2022
66
January, 2020
56
January, 2021
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
3361
bed bed3+
869
bed bed9
673
tsv
512
bigWig
40
bigBed bed9
34
bed bed9+
24
csv
13
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
3315
Homo sapiens
Biosample type
1228
tissue
1214
primary cell
751
cell line
162
in vitro differentiated cells
4
stem cell
Organ
419
epithelium
230
connective tissue
196
kidney
194
brain
187
musculature of body
165
lung
156
intestine
134
pancreas
127
heart
124
embryo
117
limb
114
vasculature
96
bodily fluid
93
skin of body
92
blood
90
large intestine
87
blood vessel
79
eye
78
extraembryonic component
74
liver
65
uterus
64
stomach
46
small intestine
43
adrenal gland
42
mammary gland
37
bone element
37
placenta
34
adipose tissue
34
prostate gland
33
ureter
31
artery
27
thymus
25
lymph node
24
gonad
24
penis
23
esophagus
19
spinal cord
16
spleen
13
lymphoid tissue
13
ovary
13
thyroid gland
11
nerve
10
pituitary gland
10
testis
9
bronchus
9
lymphatic vessel
9
mouth
9
vein
6
bone marrow
6
breast
6
skeleton
6
urinary bladder
5
tongue
4
vagina
3
nose
1
trachea
Project
2951
AMP
333
ENCODE
58
T1D
19
LungMap
Genome assembly (visualization)
3356
hg19
754
GRCh38
month_released!
October, 2022
February, 2021
August, 2021
BIOSAMPLE
TYPE
3361 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
histone modifications
variant allelic effects
chromatin state
eQTL
binding sites
caQTL
hQTL
meQTL
other
variant to gene
tissue
heart
20
5
19
2
stomach
21
3
19
brain
16
2
16
1
muscle of arm
16
1
16
1
lung
17
16
+ See 140 more…
primary cell
monocyte
2
18
84
1
1
CD8-positive, alpha-beta T cell
5
4
30
common myeloid progenitor, CD34-positive
14
13
fibroblast
4
16
6
B cell
10
6
9
+ See 263 more…
cell line
HeLa-S3
55
3
H1-hESC
39
1
1
A549
19
1
18
K562
23
1
6
1
HFFc6
19
+ See 244 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
1
10
adipocyte
6
4
2
4
neural progenitor cell
5
4
dendritic cell
6
embryonic stem cell
1
5
+ See 50 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download