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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
212
accessible chromatin
168
gene expression
120
target gene predictions
92
differential activity
53
chromatin state
48
candidate regulatory elements
40
variant allelic effects
6
binding sites
4
histone modifications
3
eQTL
1
caQTL
Date released
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
430
bed bed3+
239
tsv
173
bigWig
50
bed bed9
12
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
747
Homo sapiens
Biosample type
649
primary cell
49
tissue
29
cell line
20
in vitro differentiated cells
Organ
747
epithelium
462
kidney
350
brain
339
connective tissue
280
musculature of body
246
pancreas
237
lung
217
intestine
213
vasculature
207
heart
186
limb
166
blood vessel
161
embryo
132
skin of body
129
liver
127
large intestine
125
bodily fluid
118
blood
112
extraembryonic component
90
eye
90
stomach
72
uterus
66
adipose tissue
66
small intestine
59
adrenal gland
59
artery
56
mammary gland
54
placenta
52
bone element
49
prostate gland
46
ureter
38
thymus
37
gonad
35
esophagus
34
penis
33
lymph node
33
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
17
testis
16
lymphatic vessel
15
mouth
15
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
436
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
483
hg19
234
GRCh38
month_released!
October, 2022
February, 2021
BIOSAMPLE
TYPE
747 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
chromatin state
candidate regulatory elements
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
5
7
2
1
1
hepatocyte
8
10
3
1
1
2
3
pancreatic beta cell
8
3
2
3
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
6
3
3
3
1
+ See 129 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
2
2
esophagus squamous epithelium
1
2
2
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 11 more…
cell line
EndoC_BH1
8
8
1
3
1
colon epithelial cell
1
1
1
glomerular visceral epithelial cell
1
1
choroid plexus epithelial cell
1
epithelial cell of prostate
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
+ See 4 more…
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