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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
302
gene expression
300
accessible chromatin
200
target gene predictions
180
candidate regulatory elements
106
differential activity
101
chromatin state
58
binding sites
57
variant allelic effects
53
histone modifications
18
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
305
February, 2021
271
September, 2022
177
November, 2021
172
September, 2023
94
February, 2024
50
May, 2021
45
June, 2020
45
March, 2023
34
August, 2021
25
May, 2020
24
January, 2020
22
January, 2021
22
November, 2022
18
February, 2020
October, 2022
15
March, 2020
13
February, 2023
10
April, 2020
10
August, 2017
7
August, 2018
7
October, 2019
January, 2022
5
May, 2022
3
November, 2020
2
March, 2024
2
May, 2024
2
September, 2018
1
January, 2018
1
July, 2020
1
June, 2021
1
November, 2019
Available data
859
bed bed3+
389
tsv
231
bigWig
91
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1385
Homo sapiens
Biosample type
1081
primary cell
153
tissue
76
in vitro differentiated cells
74
cell line
1
stem cell
Organ
943
epithelium
649
kidney
442
brain
442
connective tissue
371
musculature of body
306
lung
285
intestine
273
pancreas
259
vasculature
252
heart
242
limb
214
embryo
199
blood vessel
199
bodily fluid
197
skin of body
188
blood
171
large intestine
154
liver
144
extraembryonic component
118
stomach
107
eye
88
bone element
86
adipose tissue
84
mammary gland
83
small intestine
81
uterus
77
prostate gland
72
adrenal gland
71
artery
71
placenta
64
ureter
62
penis
60
lymph node
49
thymus
46
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
23
testis
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
998
AMP
177
ENCODE
170
KPMP
22
T1D
10
LungMap
4
ITG
4
community
Genome assembly (visualization)
969
hg19
350
GRCh38
2
hg18
month_released!
October, 2022
January, 2022
BIOSAMPLE
TYPE
1385 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
1
hepatocyte
13
8
3
1
1
1
2
4
fibroblast
16
4
6
epithelial cell of proximal tubule
16
1
1
2
1
1
pericyte cell
10
10
1
1
+ See 195 more…
tissue
adipose tissue
3
2
8
7
6
1
1
3
pigmented layer of retina
20
subcutaneous adipose tissue
5
2
2
1
1
1
5
3
omental fat pad
2
2
2
5
2
2
3
breast epithelium
1
3
5
2
+ See 26 more…
in vitro differentiated cells
adipocyte
1
4
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
1
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
keratinocyte
3
1
+ See 18 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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