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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
211
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
38
binding sites
28
histone modifications
27
variant allelic effects
3
eQTL
1
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
529
bed bed3+
324
tsv
175
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
928
Homo sapiens
Biosample type
800
primary cell
61
tissue
41
cell line
26
in vitro differentiated cells
Organ
928
epithelium
631
kidney
441
brain
436
connective tissue
367
musculature of body
307
lung
288
intestine
271
pancreas
247
vasculature
244
heart
234
limb
214
embryo
200
skin of body
199
bodily fluid
191
blood vessel
188
blood
173
large intestine
152
liver
145
extraembryonic component
119
stomach
105
eye
87
bone element
86
adipose tissue
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
73
adrenal gland
72
placenta
69
artery
62
penis
61
ureter
60
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
34
spleen
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
20
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
617
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
582
hg19
233
GRCh38
month_released!
October, 2022
May, 2020
BIOSAMPLE
TYPE
928 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
1
hepatocyte
13
8
3
1
1
1
4
1
epithelial cell of proximal tubule
16
1
1
2
1
glomerular endothelial cell
14
2
1
2
1
foreskin keratinocyte
4
11
4
+ See 143 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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