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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
858
accessible chromatin
837
candidate regulatory elements
720
binding sites
609
gene expression
349
target gene predictions
162
differential activity
162
eQTL
106
chromatin state
81
variant allelic effects
74
Fine-mapped variants
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3851
bed bed3+
831
tsv
504
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
4
bigBed narrowPeak
1
bam
Organism
4911
Homo sapiens
Biosample type
1799
primary cell
1572
cell line
1249
tissue
333
in vitro differentiated cells
4
stem cell
Organ
716
epithelium
424
kidney
308
connective tissue
279
brain
208
pancreas
170
vasculature
153
musculature of body
142
heart
127
blood vessel
118
intestine
106
limb
97
skin of body
96
bodily fluid
96
lung
91
blood
82
embryo
80
liver
79
eye
72
large intestine
63
adipose tissue
53
artery
48
stomach
46
bone element
46
extraembryonic component
41
mammary gland
38
prostate gland
36
lymph node
32
penis
30
adrenal gland
27
small intestine
25
gonad
25
ureter
24
placenta
22
esophagus
19
uterus
18
spinal cord
16
nerve
16
spleen
16
thymus
16
vein
15
lymphatic vessel
13
pituitary gland
13
testis
11
ovary
10
bone marrow
10
thyroid gland
9
bronchus
9
skeleton
8
lymphoid tissue
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4255
AMP
333
ENCODE
281
KPMP
57
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4047
hg19
814
GRCh38
4
hg18
month_released!
October, 2022
September, 2022
February, 2024
BIOSAMPLE
TYPE
4959 results
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table-tab-icon
Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
chromatin state
variant allelic effects
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
14
2
8
7
1
macrophage
12
2
3
7
1
fibroblast
16
4
2
+ See 430 more…
cell line
EndoC_BH1
1
8
1
8
1
3
1
breast cancer cell
11
9
H1-hESC
1
1
1
8
1
lymphoblastoid cell line
3
1
2
6
neuroblastoma cell
8
4
+ See 737 more…
tissue
islet of Langerhans
1
5
2
11
1
12
3
1
2
2
2
kidney
2
10
15
1
7
1
2
1
heart
1
5
18
1
3
1
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
1
+ See 245 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
3
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 114 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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