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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
74
candidate regulatory elements
74
target gene predictions
49
gene expression
44
chromatin state
25
histone modifications
21
eQTL
20
binding sites
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
pQTL
1
caQTL
Date released
111
September, 2022
106
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
15
May, 2021
11
August, 2021
10
January, 2020
10
May, 2020
October, 2022
9
February, 2020
9
March, 2020
7
March, 2023
7
November, 2022
6
August, 2017
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
307
bed bed3+
65
tsv
55
bigWig
38
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
434
Homo sapiens
Biosample type
257
primary cell
95
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
nose
1
pericardium
Project
358
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
361
hg19
119
GRCh38
2
hg18
month_released!
October, 2022
organ_slims!
lung
nose
BIOSAMPLE
TYPE
434 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
histone modifications
eQTL
binding sites
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
fibroblast
16
4
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
2
2
foreskin fibroblast
1
6
2
1
2
2
fibroblast of cardiac tissue
2
3
4
3
+ See 43 more…
tissue
adipose tissue
2
7
8
3
6
4
1
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
2
1
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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