Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
466
accessible chromatin
365
target gene predictions
350
gene expression
194
chromatin state
159
candidate regulatory elements
152
differential activity
118
histone modifications
76
variant allelic effects
44
eQTL
6
binding sites
5
hQTL
4
caQTL
3
meQTL
3
sQTL
1
other
Date released
481
September, 2022
February, 2021
322
November, 2021
281
September, 2023
256
May, 2021
138
February, 2024
85
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
37
January, 2022
37
May, 2022
October, 2022
22
January, 2020
19
April, 2020
15
February, 2020
9
August, 2018
9
November, 2022
6
August, 2017
6
October, 2019
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1201
bed bed3+
469
tsv
394
bigWig
161
bed bed9
27
bed bed9+
25
txt
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
1901
Homo sapiens
Biosample type
1946
primary cell
1782
tissue
966
cell line
280
in vitro differentiated cells
4
stem cell
Organ
649
epithelium
215
connective tissue
215
kidney
137
vasculature
119
pancreas
92
blood vessel
69
skin of body
56
liver
musculature of body
32
mammary gland
31
extraembryonic component
28
brain
27
lung
25
heart
22
intestine
20
artery
20
penis
17
embryo
17
eye
15
lymphatic vessel
14
vein
11
adrenal gland
11
bronchus
11
stomach
9
esophagus
8
bone element
8
bone marrow
8
prostate gland
6
large intestine
6
placenta
4
gonad
4
small intestine
3
mouth
3
spinal cord
3
thyroid gland
3
uterus
2
ovary
1
adipose tissue
1
blood
1
bodily fluid
1
limb
1
pericardium
1
testis
1
thymus
1
trachea
Project
1265
AMP
322
ENCODE
281
KPMP
57
T1D
19
LungMap
2
community
Genome assembly (visualization)
1403
hg19
689
GRCh38
month_released!
October, 2022
February, 2021
organ_slims!
musculature of body
BIOSAMPLE
TYPE
1946 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
candidate regulatory elements
differential activity
histone modifications
variant allelic effects
eQTL
binding sites
hQTL
caQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
84
4
2
1
1
CD8-positive, alpha-beta T cell
4
5
3
1
30
common myeloid progenitor, CD34-positive
14
13
13
B cell
6
10
2
8
9
endothelial cell
15
7
5
2
1
1
+ See 373 more…
See all biosamples
Download