Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
469
gene expression
369
target gene predictions
328
candidate regulatory elements
208
histone modifications
197
chromatin state
152
differential activity
89
accessible chromatin
76
variant allelic effects
75
binding sites
46
eQTL
5
hQTL
4
caQTL
3
meQTL
3
sQTL
1
other
Date released
484
September, 2022
448
February, 2021
281
September, 2023
243
May, 2021
127
February, 2024
111
November, 2021
55
March, 2023
52
June, 2020
40
May, 2020
36
January, 2022
33
May, 2022
October, 2022
29
August, 2021
28
January, 2021
16
February, 2020
9
August, 2018
9
November, 2022
6
August, 2017
5
March, 2020
4
February, 2023
2
January, 2020
2
May, 2024
2
October, 2019
1
July, 2020
1
March, 2024
1
November, 2020
Available data
1559
bed bed3+
591
tsv
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2024
Homo sapiens
Biosample type
2532
tissue
2278
cell line
2025
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
662
epithelium
290
kidney
225
connective tissue
143
vasculature
98
blood vessel
92
skin of body
86
pancreas
43
liver
41
mammary gland
39
penis
36
extraembryonic component
35
musculature of body
26
artery
25
brain
25
heart
23
lung
20
embryo
18
vein
17
eye
14
bronchus
14
lymphatic vessel
12
bone element
12
intestine
11
bone marrow
10
prostate gland
9
blood
9
bodily fluid
8
esophagus
7
placenta
6
stomach
5
adrenal gland
trachea
4
mouth
4
spinal cord
4
uterus
3
gonad
3
large intestine
2
small intestine
2
thyroid gland
1
adipose tissue
1
limb
1
ovary
1
pericardium
1
testis
Project
1602
AMP
281
KPMP
111
ENCODE
29
T1D
2
community
Genome assembly (visualization)
1368
hg19
425
GRCh38
month_released!
October, 2022
organ_slims!
trachea
files.file_type!
bigWig
BIOSAMPLE
TYPE
2025 results
search-icon
table-tab-icon
Clear Filters
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
accessible chromatin
variant allelic effects
binding sites
eQTL
hQTL
caQTL
meQTL
sQTL
other
primary cell
monocyte
15
2
86
2
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
5
7
30
1
B cell
2
10
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 411 more…
See all biosamples
Download