Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
482
accessible chromatin
478
gene expression
368
target gene predictions
322
candidate regulatory elements
210
histone modifications
192
chromatin state
152
differential activity
79
variant allelic effects
76
binding sites
44
eQTL
5
hQTL
4
caQTL
3
meQTL
3
sQTL
1
other
Date released
481
September, 2022
451
February, 2021
333
November, 2021
281
September, 2023
255
May, 2021
152
February, 2024
84
May, 2020
56
January, 2021
55
March, 2023
52
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
4
February, 2023
4
March, 2020
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1550
bed bed3+
589
tsv
409
bigWig
160
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2374
Homo sapiens
Biosample type
2651
tissue
2419
primary cell
2280
cell line
470
in vitro differentiated cells
4
stem cell
Organ
813
epithelium
308
kidney
269
connective tissue
165
vasculature
126
pancreas
112
blood vessel
97
skin of body
63
liver
47
musculature of body
44
mammary gland
39
extraembryonic component
39
penis
33
brain
32
lung
31
heart
28
artery
23
intestine
22
embryo
22
eye
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
prostate gland
9
blood
9
bodily fluid
9
placenta
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1729
AMP
333
ENCODE
281
KPMP
57
T1D
19
LungMap
Genome assembly (visualization)
1756
hg19
700
GRCh38
month_released!
October, 2022
organ_slims!
vein
BIOSAMPLE
TYPE
2419 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
variant allelic effects
binding sites
eQTL
hQTL
caQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
2
1
1
+ See 447 more…
See all biosamples
Download