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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
268
gene expression
226
accessible chromatin
139
target gene predictions
124
candidate regulatory elements
97
differential activity
72
chromatin state
52
variant allelic effects
41
binding sites
31
histone modifications
9
Fine-mapped variants
9
eQTL
4
caQTL
Date released
218
February, 2021
190
September, 2022
165
September, 2023
127
November, 2021
79
February, 2024
38
March, 2023
36
May, 2021
27
June, 2020
25
January, 2020
25
May, 2020
24
August, 2021
20
January, 2021
17
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
4
November, 2019
3
August, 2017
3
January, 2022
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
616
bed bed3+
355
tsv
189
bigWig
80
txt
69
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1072
Homo sapiens
Biosample type
854
primary cell
145
tissue
47
cell line
26
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
446
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
751
AMP
165
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
697
hg19
283
GRCh38
month_released!
October, 2022
BIOSAMPLE
TYPE
1072 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
1
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
1
+ See 155 more…
tissue
coronary artery
1
3
3
3
3
2
3
2
1
pigmented layer of retina
20
tibial artery
1
3
2
3
3
2
3
2
ascending aorta
1
1
2
4
3
1
3
1
aorta
1
4
4
4
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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