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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
gene expression
182
candidate regulatory elements
96
target gene predictions
94
chromatin state
74
accessible chromatin
60
differential activity
20
histone modifications
20
variant allelic effects
17
binding sites
12
eQTL
3
Fine-mapped variants
1
caQTL
Date released
271
September, 2022
214
February, 2021
140
September, 2023
38
August, 2021
30
February, 2024
22
May, 2020
20
June, 2020
17
January, 2020
13
March, 2020
11
February, 2020
8
November, 2021
4
March, 2023
3
August, 2017
3
May, 2021
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
407
bed bed3+
279
tsv
91
bed bed9
87
txt
59
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
805
Homo sapiens
Biosample type
371
primary cell
359
tissue
67
cell line
8
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
446
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
657
AMP
140
KPMP
8
ENCODE
Genome assembly (visualization)
508
hg19
165
GRCh38
2
hg18
month_released!
October, 2022
BIOSAMPLE
TYPE
805 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
histone modifications
variant allelic effects
binding sites
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
1
3
1
8
4
2
1
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
1
2
+ See 68 more…
tissue
kidney
7
29
14
16
10
2
1
1
1
liver
1
13
10
9
4
1
2
1
7
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 17 more…
cell line
HepG2
2
3
2
2
5
2
HEK293
3
1
1
1
1
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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