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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
gene expression
182
candidate regulatory elements
96
target gene predictions
91
chromatin state
74
accessible chromatin
60
differential activity
20
histone modifications
20
variant allelic effects
17
binding sites
12
eQTL
3
Fine-mapped variants
1
caQTL
Date released
271
September, 2022
214
February, 2021
140
September, 2023
38
August, 2021
30
February, 2024
22
May, 2020
20
June, 2020
17
January, 2020
13
March, 2020
11
February, 2020
8
November, 2021
4
March, 2023
August, 2017
3
May, 2021
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
405
bed bed3+
279
tsv
91
bed bed9
87
txt
59
bigWig
3
csv
2
bigBed bed9
Organism
802
Homo sapiens
Biosample type
371
primary cell
357
tissue
66
cell line
8
in vitro differentiated cells
Organ
940
epithelium
650
kidney
454
brain
441
connective tissue
369
musculature of body
306
lung
284
intestine
274
pancreas
261
vasculature
255
heart
244
limb
213
embryo
201
blood vessel
199
skin of body
197
bodily fluid
186
blood
170
large intestine
152
liver
145
extraembryonic component
118
stomach
107
eye
88
bone element
87
adipose tissue
83
mammary gland
83
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
654
AMP
140
KPMP
8
ENCODE
Genome assembly (visualization)
505
hg19
165
GRCh38
2
hg18
month_released!
October, 2022
August, 2017
BIOSAMPLE
TYPE
802 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
histone modifications
variant allelic effects
binding sites
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
1
3
1
8
4
2
1
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
1
2
+ See 68 more…
tissue
kidney
7
29
14
16
10
2
1
1
1
liver
1
13
10
7
4
1
2
1
7
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 17 more…
cell line
HepG2
2
3
1
2
5
2
HEK293
3
1
1
1
1
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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