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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
candidate regulatory elements
228
gene expression
140
target gene predictions
129
chromatin state
87
accessible chromatin
60
differential activity
33
histone modifications
31
binding sites
21
variant allelic effects
15
eQTL
3
Fine-mapped variants
1
caQTL
Date released
373
September, 2022
282
February, 2021
140
September, 2023
38
August, 2021
31
February, 2024
28
June, 2020
22
May, 2020
18
November, 2021
17
January, 2020
13
March, 2020
11
February, 2020
8
May, 2021
October, 2022
5
January, 2022
4
August, 2017
4
March, 2023
4
March, 2024
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
568
bed bed3+
281
tsv
125
bed bed9
87
txt
64
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
1005
Homo sapiens
Biosample type
468
primary cell
384
tissue
136
cell line
17
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
847
AMP
140
KPMP
18
ENCODE
Genome assembly (visualization)
703
hg19
212
GRCh38
2
hg18
month_released!
October, 2022
BIOSAMPLE
TYPE
1005 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
histone modifications
binding sites
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
13
3
1
8
4
1
2
epithelial cell of proximal tubule
2
16
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
2
1
1
+ See 81 more…
tissue
kidney
29
7
14
16
10
2
1
1
1
liver
13
1
10
9
4
1
2
1
7
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 24 more…
cell line
HepG2
2
3
2
2
5
2
HEK293
3
1
1
1
1
1
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
+ See 30 more…
in vitro differentiated cells
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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