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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
183
candidate regulatory elements
119
target gene predictions
115
accessible chromatin
94
chromatin state
89
differential activity
27
variant allelic effects
19
eQTL
12
histone modifications
10
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
269
September, 2022
219
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
25
May, 2020
21
November, 2021
20
January, 2021
19
June, 2020
18
January, 2020
12
March, 2020
11
February, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
2
April, 2019
2
March, 2024
2
November, 2019
October, 2022
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
466
bed bed3+
327
tsv
93
bigWig
90
bed bed9
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
927
Homo sapiens
Biosample type
434
primary cell
415
tissue
74
cell line
4
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
448
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
744
AMP
140
KPMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
571
hg19
166
GRCh38
month_released!
October, 2022
BIOSAMPLE
TYPE
927 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic ductal cell
3
3
6
3
1
2
1
pancreatic beta cell
3
3
8
3
1
pancreatic alpha cell
3
3
7
3
1
+ See 80 more…
tissue
kidney
7
29
14
10
16
1
1
2
1
islet of Langerhans
11
1
6
3
1
13
1
2
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 26 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
Panc1
2
2
1
+ See 13 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
See all biosamples
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