Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
78
target gene predictions
15
accessible chromatin
5
binding sites
4
histone modifications
1
chromatin state
1
variant allelic effects
Date released
140
September, 2022
70
February, 2021
9
November, 2021
6
June, 2020
4
May, 2021
October, 2022
3
April, 2020
1
August, 2017
1
February, 2024
1
March, 2020
Available data
235
bed bed3+
70
bed bed9
9
bigWig
1
tsv
Organism
235
Homo sapiens
Biosample type
136
tissue
71
cell line
28
primary cell
Organ
541
epithelium
318
connective tissue
307
kidney
303
brain
278
musculature of body
235
lung
227
intestine
177
embryo
175
limb
173
heart
171
bodily fluid
162
blood
161
skin of body
159
pancreas
159
vasculature
136
large intestine
121
blood vessel
111
extraembryonic component
100
liver
96
eye
93
stomach
75
uterus
70
mammary gland
69
bone element
64
small intestine
63
prostate gland
57
adrenal gland
55
placenta
52
lymph node
52
penis
51
ureter
49
adipose tissue
45
artery
38
thymus
36
gonad
33
esophagus
28
spinal cord
26
spleen
18
lymphoid tissue
18
testis
17
ovary
17
thyroid gland
16
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
223
AMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
235
hg19
9
GRCh38
month_released!
October, 2022
BIOSAMPLE
TYPE
235 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
variant allelic effects
tissue
lung
33
17
left lung
26
13
right lung
22
11
1
upper lobe of left lung
7
3
1
1
1
cell line
A549
21
19
1
1
1
IMR-90
2
2
1
1
1
PC-9
2
2
1
1
1
WI38
5
1
NCI-H226 cell
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
1
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
type I pneumocyte
1
3
endothelial cell of artery
1
+ See 1 more…
See all biosamples
Download