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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
19
target gene predictions
15
chromatin state
8
binding sites
6
accessible chromatin
4
histone modifications
1
variant allelic effects
Date released
42
September, 2022
26
February, 2021
6
November, 2021
3
June, 2020
October, 2022
2
May, 2021
1
August, 2017
1
February, 2024
Available data
67
bed bed3+
14
bed bed9
3
bigWig
Organism
81
Homo sapiens
Biosample type
44
primary cell
35
cell line
in vitro differentiated cells
2
tissue
Organ
917
epithelium
649
kidney
456
brain
396
connective tissue
370
musculature of body
307
lung
288
intestine
274
pancreas
260
vasculature
254
heart
244
limb
202
blood vessel
199
bodily fluid
191
skin of body
188
blood
184
embryo
173
large intestine
148
liver
140
extraembryonic component
119
stomach
101
eye
88
adipose tissue
88
bone element
84
small intestine
82
uterus
81
mammary gland
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
60
lymph node
56
penis
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
75
AMP
6
ENCODE
Genome assembly (visualization)
81
hg19
20
GRCh38
month_released!
October, 2022
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
81 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
3
1
myoepithelial cell of mammary gland
4
2
2
fibroblast of mammary gland
2
1
1
1
1
1
luminal epithelial cell of mammary gland
1
3
1
2
cell line
MCF-7
9
6
5
2
1
2
T47D
3
2
2
MCF 10A
3
tissue
mammary gland
1
1
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