Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
175
target gene predictions
114
accessible chromatin
91
gene expression
56
variant allelic effects
11
chromatin state
7
eQTL
6
binding sites
5
differential activity
2
candidate regulatory elements
Date released
2590
February, 2021
2511
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
359
bed bed3+
103
bigWig
84
tsv
24
csv
11
bigBed narrowPeak
6
bed bed9
6
bigBed bed9
Organism
467
Homo sapiens
Biosample type
175
primary cell
169
cell line
88
tissue
35
in vitro differentiated cells
Organ
90
epithelium
51
embryo
51
uterus
33
vasculature
32
liver
30
brain
29
pancreas
28
blood
28
bodily fluid
28
connective tissue
26
blood vessel
20
musculature of body
17
heart
15
kidney
7
limb
6
adipose tissue
6
intestine
4
artery
3
eye
3
large intestine
3
ureter
2
esophagus
2
stomach
2
vein
1
adrenal gland
1
bronchus
1
lung
1
lymphoid tissue
1
mammary gland
1
nerve
1
prostate gland
1
skin of body
1
spinal cord
1
thyroid gland
Project
466
AMP
1
T1D
Genome assembly (visualization)
379
hg19
284
GRCh38
month_released!
September, 2018
BIOSAMPLE
TYPE
467 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
gene expression
variant allelic effects
chromatin state
eQTL
binding sites
differential activity
candidate regulatory elements
primary cell
endothelial cell of hepatic sinusoid
4
4
6
hepatocyte
6
5
1
fibroblast
6
olfactory receptor cell
6
skeletal muscle fiber
2
2
2
+ See 79 more…
cell line
HeLa-S3
51
H1-hESC
37
HFFc6
19
K562
16
GM12878
6
+ See 20 more…
tissue
left cardiac atrium
1
5
Ammon's horn
1
1
aorta
2
brain
1
1
caudate nucleus
1
1
+ See 60 more…
in vitro differentiated cells
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
hepatocyte(AFP)
3
pancreatic ductal cell
3
SGBS preadipocytes
2
+ See 7 more…
See all biosamples
Download