Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
471
accessible chromatin
369
target gene predictions
324
candidate regulatory elements
210
histone modifications
168
chromatin state
152
differential activity
100
binding sites
80
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
481
September, 2022
454
February, 2021
333
November, 2021
281
September, 2023
255
May, 2021
151
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1574
bed bed3+
591
tsv
403
bigWig
162
bed bed9
108
txt
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2376
Homo sapiens
Biosample type
2632
tissue
2421
primary cell
2292
cell line
470
in vitro differentiated cells
4
stem cell
Organ
817
epithelium
309
kidney
280
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
47
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
13
bone element
12
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1727
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
1753
hg19
699
GRCh38
month_released!
September, 2018
May, 2022
organ_slims!
prostate gland
BIOSAMPLE
TYPE
2421 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
B cell
2
6
10
14
8
endothelial cell
9
13
7
1
2
2
1
2
+ See 444 more…
See all biosamples
Download