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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
886
accessible chromatin
521
target gene predictions
130
histone modifications
123
variant allelic effects
99
binding sites
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
candidate regulatory elements
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
February, 2021
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
1836
bed bed3+
720
tsv
528
bigWig
40
bigBed bed9
36
bed bed9
34
bed bed9+
25
txt
24
csv
12
bigBed narrowPeak
1
bam
Organism
1790
Homo sapiens
Biosample type
934
primary cell
459
cell line
322
tissue
115
in vitro differentiated cells
4
stem cell
Organ
333
epithelium
164
connective tissue
104
pancreas
80
brain
71
embryo
67
vasculature
66
bodily fluid
65
blood
64
kidney
63
eye
58
uterus
55
heart
54
musculature of body
48
blood vessel
48
intestine
47
liver
29
lung
29
skin of body
26
large intestine
25
limb
19
adipose tissue
18
stomach
17
artery
17
mammary gland
15
adrenal gland
13
extraembryonic component
11
lymph node
10
bone element
10
pituitary gland
9
esophagus
9
gonad
8
prostate gland
8
small intestine
7
ureter
6
penis
6
placenta
6
vein
5
bronchus
5
lymphatic vessel
5
nerve
5
ovary
5
thymus
5
thyroid gland
4
bone marrow
4
spinal cord
4
spleen
3
lymphoid tissue
3
testis
2
breast
2
urinary bladder
1
mouth
1
nose
1
tongue
1
trachea
Project
1423
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
1828
hg19
783
GRCh38
1
hg18
month_released!
September, 2022
February, 2021
BIOSAMPLE
TYPE
1836 results
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Clear Filters
accessible chromatin
target gene predictions
histone modifications
variant allelic effects
binding sites
chromatin state
caQTL
eQTL
hQTL
candidate regulatory elements
meQTL
other
pQTL
variant to gene
sQTL
primary cell
monocyte
18
2
84
1
1
CD8-positive, alpha-beta T cell
4
5
30
endothelial cell
15
7
2
2
1
fibroblast
16
4
6
1
macrophage
12
3
3
1
+ See 253 more…
cell line
HeLa-S3
52
1
H1-hESC
1
38
1
K562
1
17
1
1
HFFc6
19
EndoC_BH1
8
1
1
+ See 199 more…
tissue
retina
23
1
pigmented layer of retina
20
islet of Langerhans
5
1
1
1
3
1
1
kidney
10
1
1
pancreas
5
3
1
1
+ See 119 more…
in vitro differentiated cells
neural progenitor cell
10
1
13
adipocyte
4
4
4
dendritic cell
6
embryonic stem cell
5
1
retinal pigment epithelial cell
6
+ See 40 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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