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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
903
accessible chromatin
839
candidate regulatory elements
817
binding sites
683
gene expression
522
target gene predictions
167
differential activity
140
variant allelic effects
111
chromatin state
74
Fine-mapped variants
68
eQTL
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4240
bed bed3+
898
tsv
538
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
5284
Homo sapiens
Biosample type
1945
primary cell
1800
cell line
1219
tissue
362
in vitro differentiated cells
4
stem cell
Organ
798
epithelium
426
kidney
332
connective tissue
268
brain
229
pancreas
188
vasculature
170
musculature of body
144
heart
143
bodily fluid
141
blood vessel
138
blood
134
embryo
122
intestine
109
liver
104
limb
100
lung
99
skin of body
82
eye
74
large intestine
70
uterus
62
adipose tissue
51
artery
49
stomach
47
bone element
46
extraembryonic component
45
mammary gland
38
lymph node
38
prostate gland
34
penis
30
adrenal gland
26
small intestine
25
ureter
24
placenta
23
gonad
21
esophagus
18
spinal cord
17
vein
16
thymus
15
lymphatic vessel
15
nerve
15
spleen
12
pituitary gland
12
testis
10
bone marrow
10
bronchus
10
ovary
10
thyroid gland
9
lymphoid tissue
9
skeleton
6
breast
6
mouth
5
trachea
4
tongue
4
urinary bladder
3
vagina
1
nose
1
pericardium
Project
4625
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4448
hg19
927
GRCh38
4
hg18
month_released!
September, 2022
January, 2022
BIOSAMPLE
TYPE
5332 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
1
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
2
1
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
6
+ See 435 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
1
2
17
1
breast cancer cell
11
9
+ See 745 more…
tissue
islet of Langerhans
1
5
2
11
1
1
3
2
10
2
2
kidney
2
10
15
1
7
1
2
1
heart
1
5
18
1
3
1
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
+ See 250 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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