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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
893
accessible chromatin
839
candidate regulatory elements
816
binding sites
634
gene expression
479
target gene predictions
167
differential activity
145
eQTL
140
variant allelic effects
77
chromatin state
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
February, 2020
56
January, 2021
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4185
bed bed3+
774
tsv
535
bigWig
108
txt
40
bigBed bed9
36
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5152
Homo sapiens
Biosample type
1923
primary cell
1796
cell line
1121
tissue
355
in vitro differentiated cells
2
stem cell
Organ
781
epithelium
415
kidney
319
connective tissue
230
brain
222
pancreas
174
vasculature
153
musculature of body
143
bodily fluid
138
blood
133
embryo
127
blood vessel
123
intestine
121
heart
102
skin of body
100
lung
96
liver
91
limb
80
eye
75
large intestine
71
uterus
52
adipose tissue
49
stomach
47
extraembryonic component
46
bone element
45
mammary gland
44
artery
39
prostate gland
38
lymph node
34
penis
30
adrenal gland
26
small intestine
25
gonad
25
placenta
25
ureter
23
esophagus
16
vein
15
lymphatic vessel
15
spinal cord
15
spleen
15
thymus
14
testis
13
pituitary gland
11
thyroid gland
10
bronchus
10
nerve
10
ovary
9
bone marrow
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
vagina
3
urinary bladder
1
nose
Project
4490
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4262
hg19
929
GRCh38
4
hg18
month_released!
September, 2022
February, 2020
May, 2022
March, 2020
BIOSAMPLE
TYPE
5199 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
endothelial cell
1
13
2
9
7
1
2
2
fibroblast
14
1
4
2
6
macrophage
11
2
3
7
3
1
+ See 434 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
K562
1
1
1
2
17
1
EndoC_BH1
1
8
1
8
3
1
breast cancer cell
11
9
+ See 743 more…
tissue
islet of Langerhans
1
5
1
9
1
13
1
3
2
2
2
kidney
2
10
15
1
7
1
1
2
heart
1
5
18
1
2
2
2
retina
1
23
3
1
1
stomach
1
3
21
1
2
1
+ See 248 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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