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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
970
histone modifications
839
candidate regulatory elements
834
accessible chromatin
816
binding sites
522
target gene predictions
124
variant allelic effects
105
chromatin state
72
Fine-mapped variants
63
eQTL
12
gene expression
6
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
other
2
variant to gene
Date released
September, 2022
2412
February, 2021
333
November, 2021
307
February, 2024
298
May, 2021
288
June, 2020
138
May, 2020
117
March, 2020
99
October, 2022
74
August, 2021
January, 2020
56
January, 2021
49
May, 2022
41
November, 2022
35
August, 2017
26
February, 2023
25
February, 2020
19
April, 2020
14
November, 2019
14
October, 2019
9
May, 2019
8
April, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4171
bed bed3+
468
bigWig
96
tsv
34
bed bed9+
34
bigBed bed9
30
bed bed9
15
bigBed narrowPeak
1
bam
Organism
4334
Homo sapiens
Biosample type
1767
cell line
1293
primary cell
1036
tissue
279
in vitro differentiated cells
4
stem cell
Organ
435
epithelium
258
connective tissue
224
brain
158
musculature of body
148
kidney
142
bodily fluid
139
pancreas
137
blood
124
embryo
119
intestine
115
vasculature
111
heart
99
lung
97
skin of body
93
limb
90
blood vessel
78
eye
76
liver
72
large intestine
68
uterus
47
stomach
46
extraembryonic component
45
mammary gland
43
bone element
42
adipose tissue
38
lymph node
37
artery
37
prostate gland
34
penis
29
adrenal gland
26
small intestine
24
placenta
22
ureter
21
gonad
19
esophagus
17
spinal cord
16
thymus
14
spleen
13
vein
12
nerve
11
pituitary gland
11
testis
10
bone marrow
10
bronchus
10
lymphatic vessel
9
ovary
9
skeleton
9
thyroid gland
8
lymphoid tissue
5
breast
5
mouth
5
trachea
3
tongue
3
urinary bladder
2
vagina
1
nose
Project
3966
AMP
333
ENCODE
58
T1D
19
LungMap
5
ITG
Genome assembly (visualization)
4381
hg19
964
GRCh38
4
hg18
month_released!
September, 2022
January, 2020
BIOSAMPLE
TYPE
4381 results
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Clear Filters
histone modifications
candidate regulatory elements
accessible chromatin
binding sites
target gene predictions
variant allelic effects
chromatin state
Fine-mapped variants
eQTL
gene expression
caQTL
hQTL
meQTL
pQTL
sQTL
other
variant to gene
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
38
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 741 more…
primary cell
monocyte
86
18
1
2
1
2
1
CD8-positive, alpha-beta T cell
30
7
4
5
1
endothelial cell
1
15
2
7
2
1
1
1
fibroblast
16
1
4
6
smooth muscle cell
9
6
2
1
1
1
+ See 324 more…
tissue
kidney
2
15
8
1
1
2
1
heart
1
18
3
1
1
2
2
retina
1
3
22
1
1
stomach
1
21
3
2
liver
2
6
4
1
3
2
5
1
+ See 219 more…
in vitro differentiated cells
neural progenitor cell
14
1
10
1
adipocyte
1
2
4
1
4
4
embryonic stem cell
1
5
1
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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