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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
839
candidate regulatory elements
817
binding sites
683
gene expression
614
accessible chromatin
522
target gene predictions
167
differential activity
140
variant allelic effects
111
chromatin state
74
Fine-mapped variants
68
eQTL
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3952
bed bed3+
898
tsv
538
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
4995
Homo sapiens
Biosample type
1892
primary cell
1648
cell line
1156
tissue
341
in vitro differentiated cells
4
stem cell
Organ
773
epithelium
411
kidney
312
connective tissue
247
brain
225
pancreas
182
vasculature
164
musculature of body
139
heart
137
blood vessel
131
bodily fluid
126
blood
124
embryo
112
intestine
104
liver
98
limb
94
lung
91
skin of body
76
eye
68
uterus
67
large intestine
61
adipose tissue
48
artery
46
stomach
42
bone element
41
mammary gland
40
extraembryonic component
33
prostate gland
31
penis
30
lymph node
29
adrenal gland
25
small intestine
24
ureter
22
placenta
19
esophagus
19
gonad
16
spinal cord
16
vein
15
thymus
14
lymphatic vessel
14
nerve
14
spleen
12
pituitary gland
10
bone marrow
10
testis
9
bronchus
9
ovary
9
skeleton
9
thyroid gland
7
lymphoid tissue
5
breast
5
mouth
4
trachea
3
tongue
3
urinary bladder
3
vagina
1
pericardium
Project
4336
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4160
hg19
927
GRCh38
4
hg18
month_released!
September, 2022
June, 2020
January, 2022
BIOSAMPLE
TYPE
5043 results
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table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
accessible chromatin
target gene predictions
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
1
15
16
2
1
2
1
1
CD8-positive, alpha-beta T cell
30
7
3
4
5
1
endothelial cell
1
2
9
15
7
2
1
2
hepatocyte
4
1
13
7
2
2
fibroblast
1
16
4
6
+ See 430 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
2
8
38
EndoC_BH1
1
1
8
8
1
3
1
K562
1
1
2
17
1
breast cancer cell
11
9
+ See 725 more…
tissue
islet of Langerhans
1
2
11
4
1
1
3
2
10
2
2
kidney
2
15
1
7
9
1
2
1
heart
1
18
1
3
3
1
2
2
retina
1
3
1
1
22
1
1
liver
2
6
1
1
3
3
1
2
6
1
+ See 244 more…
in vitro differentiated cells
neural progenitor cell
15
1
7
10
1
adipocyte
1
2
1
1
3
4
4
embryonic stem cell
1
1
6
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
cardiomyocytes
11
+ See 113 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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