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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
857
histone modifications
839
candidate regulatory elements
817
binding sites
593
gene expression
592
accessible chromatin
384
target gene predictions
167
differential activity
166
eQTL
140
variant allelic effects
106
chromatin state
74
Fine-mapped variants
13
caQTL
4
variant to gene
3
pQTL
2
other
2
sQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
May, 2021
378
February, 2024
333
November, 2021
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3672
bed bed3+
810
tsv
529
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
31
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
4712
Homo sapiens
Biosample type
1673
primary cell
1595
cell line
1181
tissue
305
in vitro differentiated cells
4
stem cell
Organ
739
epithelium
412
kidney
302
connective tissue
254
brain
196
pancreas
182
vasculature
159
musculature of body
138
heart
137
blood vessel
127
bodily fluid
122
blood
117
embryo
109
intestine
102
liver
97
limb
91
lung
89
skin of body
76
eye
67
uterus
64
large intestine
61
adipose tissue
49
artery
45
stomach
42
bone element
39
mammary gland
38
extraembryonic component
32
prostate gland
30
penis
29
lymph node
28
adrenal gland
25
small intestine
24
ureter
22
esophagus
22
placenta
21
gonad
16
spinal cord
15
nerve
15
vein
14
lymphatic vessel
14
spleen
14
thymus
12
testis
10
bone marrow
9
bronchus
9
ovary
9
skeleton
9
thyroid gland
7
lymphoid tissue
6
mouth
5
breast
4
trachea
4
vagina
3
pituitary gland
3
tongue
3
urinary bladder
1
pericardium
Project
4053
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
3867
hg19
935
GRCh38
4
hg18
month_released!
September, 2022
June, 2020
May, 2021
BIOSAMPLE
TYPE
4760 results
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table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
accessible chromatin
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
variant to gene
pQTL
other
sQTL
representative DNase hypersensitivity sites
primary cell
endothelial cell
1
2
8
15
7
1
2
2
fibroblast
1
16
4
2
6
hepatocyte
4
1
13
7
1
2
macrophage
1
12
3
7
3
1
epithelial cell of proximal tubule
1
1
16
1
1
+ See 426 more…
cell line
HeLa-S3
2
1
51
H1-hESC
1
2
8
37
K562
1
1
2
16
1
breast cancer cell
11
9
HFFc6
19
+ See 724 more…
tissue
islet of Langerhans
1
2
9
3
1
13
1
3
2
2
2
kidney
2
15
1
7
9
1
1
2
heart
1
18
1
3
3
1
2
2
retina
1
3
1
1
22
1
1
liver
2
6
1
1
3
2
1
7
2
1
+ See 248 more…
in vitro differentiated cells
neural progenitor cell
15
1
7
10
1
adipocyte
1
2
1
1
3
4
cardiomyocytes
11
hematopoietic multipotent progenitor cell
1
9
1
extended pluripotent stem (EPS) cells
9
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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