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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
853
accessible chromatin
839
candidate regulatory elements
816
binding sites
672
gene expression
461
target gene predictions
169
eQTL
167
differential activity
108
chromatin state
61
variant allelic effects
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
Fine-mapped variants
2
other
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
May, 2020
128
August, 2021
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4065
bed bed3+
819
tsv
489
bigWig
108
txt
37
bigBed bed9
34
bed bed9+
33
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5153
Homo sapiens
Biosample type
1891
primary cell
1801
cell line
1111
tissue
348
in vitro differentiated cells
2
stem cell
Organ
777
epithelium
405
kidney
319
connective tissue
229
brain
218
pancreas
164
vasculature
157
musculature of body
143
bodily fluid
138
blood
133
embryo
123
intestine
121
blood vessel
121
heart
102
skin of body
100
lung
97
liver
87
limb
80
eye
75
large intestine
71
uterus
54
adipose tissue
49
stomach
47
extraembryonic component
46
bone element
45
mammary gland
43
artery
39
prostate gland
38
lymph node
34
penis
30
adrenal gland
26
small intestine
25
gonad
25
placenta
23
esophagus
22
ureter
16
spinal cord
15
lymphatic vessel
15
spleen
14
testis
14
thymus
14
vein
13
pituitary gland
11
thyroid gland
10
bronchus
10
nerve
10
ovary
9
bone marrow
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
vagina
3
urinary bladder
1
nose
1
pericardium
Project
4448
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4198
hg19
949
GRCh38
4
hg18
month_released!
September, 2022
March, 2020
May, 2020
BIOSAMPLE
TYPE
5155 results
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table-tab-icon
Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
chromatin state
variant allelic effects
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
Fine-mapped variants
other
representative DNase hypersensitivity sites
primary cell
monocyte
86
16
1
15
1
4
2
1
1
CD8-positive, alpha-beta T cell
30
2
7
3
4
1
endothelial cell
1
15
2
9
7
1
2
2
fibroblast
16
1
4
2
6
macrophage
12
2
2
7
3
1
+ See 435 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
K562
1
1
1
2
17
1
EndoC_BH1
1
8
1
8
3
breast cancer cell
11
9
+ See 743 more…
tissue
kidney
2
10
15
1
7
1
2
islet of Langerhans
1
3
1
9
1
13
3
2
2
2
retina
1
23
3
1
1
1
heart
1
5
18
1
3
1
stomach
1
3
21
1
2
1
+ See 251 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 115 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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