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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
870
accessible chromatin
416
gene expression
382
target gene predictions
167
differential activity
165
eQTL
139
variant allelic effects
106
chromatin state
99
binding sites
74
Fine-mapped variants
17
histone modifications
13
caQTL
4
variant to gene
3
pQTL
2
candidate regulatory elements
2
other
2
sQTL
Date released
February, 2021
September, 2022
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
1551
bed bed3+
634
tsv
515
bigWig
35
bigBed bed9
34
bed bed9+
31
bed bed9
25
txt
24
csv
12
bigBed narrowPeak
1
bam
Organism
2413
Homo sapiens
Biosample type
1272
primary cell
603
tissue
443
cell line
137
in vitro differentiated cells
4
stem cell
Organ
568
epithelium
239
kidney
215
connective tissue
169
pancreas
165
brain
139
vasculature
105
blood vessel
95
heart
81
liver
74
embryo
73
musculature of body
65
bodily fluid
65
eye
64
blood
59
uterus
48
intestine
45
limb
39
adipose tissue
37
artery
29
skin of body
27
lung
25
large intestine
19
stomach
15
adrenal gland
15
mammary gland
14
esophagus
13
gonad
13
nerve
11
bone element
11
extraembryonic component
10
lymph node
10
lymphatic vessel
9
spinal cord
9
vein
8
prostate gland
8
small intestine
7
ureter
6
ovary
6
placenta
6
testis
6
thyroid gland
5
bone marrow
5
bronchus
5
penis
5
spleen
4
lymphoid tissue
4
thymus
3
breast
3
mouth
3
urinary bladder
2
pituitary gland
2
tongue
2
vagina
1
nose
1
pericardium
1
trachea
Project
1752
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
1743
hg19
924
GRCh38
4
hg18
month_released!
September, 2022
May, 2021
February, 2021
BIOSAMPLE
TYPE
2461 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
binding sites
Fine-mapped variants
histone modifications
caQTL
variant to gene
pQTL
candidate regulatory elements
other
sQTL
primary cell
endothelial cell
15
4
7
1
2
2
fibroblast
16
4
2
6
1
macrophage
12
1
3
7
3
1
hepatocyte
8
10
1
2
3
smooth muscle cell
9
1
6
1
2
1
+ See 344 more…
tissue
islet of Langerhans
4
3
1
12
1
3
1
2
2
2
retina
23
1
1
1
pigmented layer of retina
20
liver
4
1
2
1
7
2
1
subcutaneous adipose tissue
2
2
1
5
1
1
3
+ See 169 more…
cell line
HeLa-S3
51
1
H1-hESC
1
8
37
1
HFFc6
19
K562
1
16
1
1
GM12878
1
6
1
1
+ See 198 more…
in vitro differentiated cells
neural progenitor cell
10
7
1
14
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
adipocyte
4
4
retinal pigment epithelial cell
6
+ See 44 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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