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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
881
accessible chromatin
857
histone modifications
839
candidate regulatory elements
816
binding sites
582
gene expression
340
target gene predictions
168
eQTL
167
differential activity
140
variant allelic effects
106
chromatin state
13
caQTL
4
variant to gene
3
pQTL
2
Fine-mapped variants
2
other
2
sQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3915
bed bed3+
733
tsv
529
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
31
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
4875
Homo sapiens
Biosample type
1740
cell line
1723
primary cell
1140
tissue
316
in vitro differentiated cells
2
stem cell
Organ
758
epithelium
424
kidney
315
connective tissue
237
brain
191
pancreas
176
vasculature
156
musculature of body
139
bodily fluid
134
blood
129
blood vessel
128
heart
126
embryo
117
intestine
97
liver
97
skin of body
96
lung
94
limb
82
eye
70
large intestine
69
uterus
54
adipose tissue
47
bone element
47
stomach
46
artery
44
extraembryonic component
43
mammary gland
37
lymph node
37
prostate gland
33
penis
28
adrenal gland
25
small intestine
25
ureter
24
gonad
24
placenta
23
esophagus
15
lymphatic vessel
15
spinal cord
15
vein
14
spleen
14
testis
14
thymus
13
nerve
10
bone marrow
10
bronchus
10
thyroid gland
9
lymphoid tissue
9
ovary
9
skeleton
7
mouth
6
breast
5
trachea
4
tongue
4
vagina
3
pituitary gland
3
urinary bladder
1
nose
1
pericardium
Project
4214
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4038
hg19
863
GRCh38
4
hg18
month_released!
September, 2022
May, 2021
March, 2020
BIOSAMPLE
TYPE
4923 results
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table-tab-icon
Clear Filters
accessible chromatin
histone modifications
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
caQTL
variant to gene
pQTL
Fine-mapped variants
other
sQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
2
1
51
H1-hESC
1
1
2
8
37
K562
1
1
1
2
16
1
breast cancer cell
11
9
HFFc6
19
+ See 741 more…
primary cell
endothelial cell
15
1
2
8
7
1
2
2
fibroblast
16
1
4
2
6
macrophage
12
1
3
7
3
1
hepatocyte
8
4
1
9
1
2
epithelial cell of proximal tubule
1
1
1
16
1
+ See 432 more…
tissue
kidney
10
2
15
1
7
1
1
2
islet of Langerhans
4
1
1
7
1
13
1
3
2
2
2
heart
5
1
18
1
3
2
2
retina
23
1
3
1
1
1
1
stomach
3
1
21
1
1
+ See 252 more…
in vitro differentiated cells
neural progenitor cell
10
15
1
7
adipocyte
4
1
2
1
1
4
hematopoietic multipotent progenitor cell
1
1
9
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 107 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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