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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
839
candidate regulatory elements
817
binding sites
683
gene expression
631
accessible chromatin
394
target gene predictions
169
eQTL
167
differential activity
108
chromatin state
74
Fine-mapped variants
61
variant allelic effects
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
November, 2021
289
June, 2020
286
September, 2023
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3777
bed bed3+
898
tsv
267
bigWig
108
txt
37
bigBed bed9
34
bed bed9+
33
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
4948
Homo sapiens
Biosample type
1808
cell line
1563
primary cell
1215
tissue
358
in vitro differentiated cells
4
stem cell
Organ
656
epithelium
405
kidney
278
connective tissue
267
brain
209
pancreas
170
vasculature
155
musculature of body
143
bodily fluid
138
blood
132
embryo
130
blood vessel
126
heart
106
intestine
102
liver
96
limb
92
lung
92
skin of body
76
eye
70
large intestine
69
uterus
62
adipose tissue
49
artery
45
bone element
44
extraembryonic component
41
stomach
39
mammary gland
39
prostate gland
38
lymph node
34
penis
24
gonad
23
placenta
23
small intestine
22
ureter
21
adrenal gland
20
esophagus
19
spinal cord
16
spleen
15
vein
14
testis
14
thymus
13
nerve
13
pituitary gland
12
lymphatic vessel
9
lymphoid tissue
9
ovary
9
skeleton
9
thyroid gland
8
bone marrow
8
bronchus
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4576
AMP
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
3982
hg19
688
GRCh38
4
hg18
month_released!
September, 2022
November, 2021
May, 2020
BIOSAMPLE
TYPE
4950 results
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table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
accessible chromatin
target gene predictions
eQTL
differential activity
chromatin state
Fine-mapped variants
variant allelic effects
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
representative DNase hypersensitivity sites
cell line
HeLa-S3
2
1
52
H1-hESC
1
2
8
1
38
K562
1
1
2
1
17
1
EndoC_BH1
1
1
8
8
1
3
breast cancer cell
11
9
+ See 746 more…
primary cell
monocyte
86
1
15
16
1
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
3
1
3
1
hepatocyte
4
1
13
7
1
1
endothelial cell
1
2
9
5
1
1
2
2
CD14-positive monocyte
4
15
+ See 377 more…
tissue
islet of Langerhans
1
2
11
3
1
13
3
2
2
2
kidney
2
15
1
7
10
1
2
heart
1
18
1
3
5
1
1
retina
1
3
1
1
23
1
stomach
1
21
1
3
2
1
+ See 253 more…
in vitro differentiated cells
neural progenitor cell
15
1
7
10
1
adipocyte
1
2
1
1
4
4
4
embryonic stem cell
1
1
6
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
+ See 117 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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