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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
899
histone modifications
853
accessible chromatin
768
candidate regulatory elements
756
binding sites
663
gene expression
475
target gene predictions
167
differential activity
138
eQTL
123
variant allelic effects
97
chromatin state
38
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2410
February, 2021
September, 2022
374
May, 2021
349
February, 2024
333
November, 2021
283
September, 2023
256
June, 2020
136
May, 2020
126
August, 2021
90
March, 2020
88
January, 2022
76
October, 2022
70
March, 2023
60
January, 2020
56
January, 2021
49
May, 2022
46
February, 2020
44
November, 2022
32
February, 2023
28
March, 2024
27
August, 2017
19
April, 2020
14
October, 2019
13
November, 2019
9
August, 2018
8
April, 2019
5
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3921
bed bed3+
830
tsv
521
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
30
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
4967
Homo sapiens
Biosample type
1950
primary cell
1640
cell line
1058
tissue
361
in vitro differentiated cells
3
stem cell
Organ
798
epithelium
427
kidney
338
connective tissue
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4307
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4073
hg19
912
GRCh38
4
hg18
month_released!
September, 2022
organ_slims!
blood
brain
BIOSAMPLE
TYPE
5014 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
2
6
+ See 430 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
breast cancer cell
11
9
HFFc6
19
+ See 707 more…
tissue
islet of Langerhans
1
5
2
11
1
13
1
3
2
2
2
kidney
2
10
15
1
7
1
1
2
heart
1
5
18
1
3
1
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
1
+ See 195 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 116 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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