Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
289
gene expression
237
accessible chromatin
209
histone modifications
161
candidate regulatory elements
100
target gene predictions
99
binding sites
96
differential activity
75
variant allelic effects
46
eQTL
37
chromatin state
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
September, 2022
363
February, 2021
256
May, 2021
152
February, 2024
141
September, 2023
80
May, 2020
56
January, 2021
55
March, 2023
48
June, 2020
40
May, 2022
37
January, 2022
30
October, 2022
22
August, 2021
19
April, 2020
16
January, 2020
9
August, 2018
9
February, 2020
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
904
bed bed3+
353
tsv
170
bigWig
27
bed bed9+
21
txt
15
bigBed narrowPeak
4
bed bed9
4
bigBed bed9
Organism
1327
Homo sapiens
Biosample type
1790
cell line
1372
primary cell
1151
tissue
364
in vitro differentiated cells
4
stem cell
Organ
559
epithelium
kidney
158
connective tissue
118
vasculature
104
pancreas
81
blood vessel
52
liver
39
skin of body
33
musculature of body
23
brain
23
penis
20
artery
19
mammary gland
14
vein
13
extraembryonic component
13
lung
12
heart
10
bone element
10
eye
9
blood
9
bodily fluid
9
bone marrow
8
bronchus
8
embryo
8
lymphatic vessel
5
placenta
5
trachea
4
intestine
4
prostate gland
3
esophagus
3
uterus
2
gonad
2
stomach
1
adipose tissue
1
adrenal gland
1
limb
1
mouth
1
pericardium
1
spinal cord
1
testis
1
thyroid gland
Project
1151
AMP
ENCODE
141
KPMP
59
T1D
19
LungMap
2
community
Genome assembly (visualization)
952
hg19
206
GRCh38
month_released!
September, 2022
organ_slims!
kidney
award.project!
ENCODE
BIOSAMPLE
TYPE
1372 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
histone modifications
candidate regulatory elements
target gene predictions
binding sites
differential activity
variant allelic effects
eQTL
chromatin state
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
86
2
1
4
2
1
1
CD8-positive, alpha-beta T cell
3
3
30
7
4
1
hepatocyte
13
7
4
1
1
2
endothelial cell
9
5
1
1
2
2
1
2
CD14-positive monocyte
4
15
+ See 317 more…
See all biosamples
Download