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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
965
histone modifications
846
accessible chromatin
826
candidate regulatory elements
812
binding sites
634
gene expression
493
target gene predictions
153
eQTL
134
differential activity
129
variant allelic effects
107
chromatin state
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
2557
February, 2021
September, 2022
356
May, 2021
353
February, 2024
315
November, 2021
286
September, 2023
285
June, 2020
149
May, 2020
120
August, 2021
119
March, 2020
101
January, 2022
101
October, 2022
85
January, 2020
62
February, 2020
49
May, 2022
44
November, 2022
36
January, 2021
32
August, 2017
31
February, 2023
29
March, 2024
23
March, 2023
19
April, 2020
12
November, 2019
9
May, 2019
8
October, 2019
7
April, 2019
3
November, 2020
3
September, 2018
2
August, 2018
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
Available data
4115
bed bed3+
821
tsv
487
bigWig
108
txt
38
bigBed bed9
36
bed bed9
34
bed bed9+
21
csv
2
bigBed narrowPeak
1
bam
Organism
5153
Homo sapiens
Biosample type
1860
primary cell
1785
cell line
1188
tissue
362
in vitro differentiated cells
4
stem cell
Organ
798
epithelium
427
kidney
338
connective tissue
286
brain
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
vagina
1
nose
1
pericardium
Project
4534
AMP
315
ENCODE
281
KPMP
40
T1D
19
LungMap
7
community
5
ITG
Genome assembly (visualization)
4309
hg19
984
GRCh38
4
hg18
month_released!
September, 2022
organ_slims!
vagina
pancreas
BIOSAMPLE
TYPE
5201 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
2
6
+ See 423 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 743 more…
tissue
kidney
2
10
15
1
7
1
1
2
heart
1
5
18
1
3
1
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
1
liver
2
4
6
1
1
3
7
1
2
1
+ See 245 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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