Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
candidate regulatory elements
11
target gene predictions
10
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
2
eQTL
Date released
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
March, 2020
1
October, 2022
Available data
72
bed bed3+
3
bigWig
tsv
Organism
74
Homo sapiens
Biosample type
46
tissue
22
cell line
6
primary cell
Organ
474
epithelium
275
connective tissue
219
brain
176
kidney
157
musculature of body
157
pancreas
142
bodily fluid
137
blood
127
vasculature
124
embryo
122
intestine
118
heart
100
lung
100
skin of body
97
blood vessel
89
limb
82
liver
80
eye
74
large intestine
69
uterus
48
stomach
47
extraembryonic component
45
mammary gland
43
adipose tissue
43
bone element
38
artery
38
lymph node
38
prostate gland
34
penis
30
adrenal gland
27
small intestine
25
placenta
25
ureter
24
gonad
22
esophagus
16
thymus
16
vein
15
spleen
14
spinal cord
13
testis
12
pituitary gland
10
bone marrow
10
bronchus
10
lymphatic vessel
10
nerve
10
ovary
10
thyroid gland
9
skeleton
8
lymphoid tissue
6
breast
6
mouth
5
trachea
3
tongue
3
urinary bladder
3
vagina
1
nose
1
pericardium
Project
68
AMP
6
ENCODE
Genome assembly (visualization)
72
hg19
10
GRCh38
month_released!
September, 2022
files.file_type!
tsv
BIOSAMPLE
TYPE
74 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
tissue
large intestine
15
1
1
1
sigmoid colon
5
2
1
transverse colon
4
1
1
1
colonic mucosa
2
1
1
mucosa of rectum
2
1
+ See 5 more…
cell line
HT-29
1
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
SW480
1
1
1
1
HCT116
1
2
+ See 2 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download