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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
214
accessible chromatin
92
differential activity
79
candidate regulatory elements
78
target gene predictions
54
binding sites
41
variant allelic effects
35
histone modifications
6
eQTL
5
chromatin state
2
caQTL
Date released
238
February, 2021
September, 2022
155
September, 2023
129
November, 2021
76
February, 2024
38
March, 2023
38
May, 2021
31
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
October, 2022
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
4
March, 2024
3
August, 2017
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
502
bed bed3+
326
tsv
174
bigWig
78
txt
13
bigBed narrowPeak
6
csv
2
bed bed9
2
bigBed bed9
Organism
861
Homo sapiens
Biosample type
707
primary cell
65
tissue
62
cell line
27
in vitro differentiated cells
Organ
798
epithelium
427
kidney
340
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
548
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
507
hg19
190
GRCh38
month_released!
September, 2022
BIOSAMPLE
TYPE
861 results
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Clear Filters
gene expression
accessible chromatin
differential activity
candidate regulatory elements
target gene predictions
binding sites
variant allelic effects
histone modifications
eQTL
chromatin state
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
2
1
2
4
epithelial cell of proximal tubule
16
1
1
1
1
pancreatic ductal cell
3
6
3
3
1
1
2
glomerular endothelial cell
14
2
1
1
+ See 148 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
1
esophagus squamous epithelium
1
4
lower leg skin
4
skin of body
3
+ See 22 more…
cell line
EndoC_BH1
8
8
3
1
1
GM23248
1
1
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 20 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
mammary gland epithelial cell
1
1
1
+ See 6 more…
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