Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
834
target gene predictions
832
candidate regulatory elements
36
accessible chromatin
22
histone modifications
2
eQTL
2
pQTL
1
binding sites
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
1730
bed bed3+
833
bed bed9
49
tsv
25
txt
24
bigWig
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
Organism
1730
Homo sapiens
Biosample type
930
tissue
364
cell line
343
primary cell
93
in vitro differentiated cells
Organ
166
kidney
140
lung
136
musculature of body
120
brain
114
epithelium
109
intestine
92
limb
82
connective tissue
72
heart
68
skin of body
66
extraembryonic component
65
large intestine
54
embryo
51
bodily fluid
51
vasculature
46
blood
46
stomach
41
blood vessel
38
small intestine
36
liver
32
pancreas
32
placenta
28
adrenal gland
28
bone element
28
mammary gland
26
prostate gland
26
ureter
22
thymus
20
penis
18
eye
17
adipose tissue
16
gonad
16
lymph node
16
spinal cord
15
artery
14
esophagus
12
spleen
10
lymphoid tissue
8
mouth
8
ovary
8
testis
8
thyroid gland
8
uterus
6
nerve
6
skeleton
4
breast
4
bronchus
4
lymphatic vessel
4
tongue
4
urinary bladder
4
vagina
4
vein
2
bone marrow
2
nose
Project
1729
AMP
1
ITG
Genome assembly (visualization)
1729
hg19
39
GRCh38
1
hg18
BIOSAMPLE
TYPE
1730 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
histone modifications
eQTL
pQTL
binding sites
sQTL
tissue
heart
19
19
stomach
19
19
kidney
14
14
7
1
brain
16
16
lung
16
16
+ See 108 more…
cell line
A549
18
18
K562
6
6
MCF-7
5
5
HepG2
1
1
4
1
HeLa-S3
3
3
+ See 137 more…
primary cell
common myeloid progenitor, CD34-positive
13
13
CD4-positive, alpha-beta memory T cell
9
9
B cell
8
8
CD8-positive, alpha-beta memory T cell
7
7
mononuclear cell
6
6
+ See 87 more…
in vitro differentiated cells
neural progenitor cell
4
4
10
13
hematopoietic multipotent progenitor cell
10
10
adipocyte
2
2
endodermal cell
2
2
mesenchymal stem cell
2
2
+ See 14 more…
See all biosamples
Download