Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
167
candidate regulatory elements
122
gene expression
92
histone modifications
71
binding sites
6
accessible chromatin
2
chromatin state
2
target gene predictions
1
variant allelic effects
Date released
487
September, 2022
456
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
0
September, 2018
Available data
339
bed bed3+
122
tsv
83
txt
9
bigWig
3
bigBed narrowPeak
2
bed bed9
2
bigBed bed9
Organism
463
Homo sapiens
Biosample type
1304
cell line
649
tissue
463
primary cell
191
in vitro differentiated cells
Organ
169
epithelium
93
kidney
57
connective tissue
28
skin of body
28
vasculature
20
blood vessel
19
penis
12
mammary gland
12
pancreas
10
musculature of body
8
artery
8
blood
8
bodily fluid
8
extraembryonic component
7
liver
6
bone element
6
heart
5
bone marrow
5
brain
5
bronchus
5
embryo
5
eye
5
lung
5
vein
4
trachea
3
placenta
2
lymphatic vessel
2
prostate gland
2
uterus
1
esophagus
1
intestine
1
mouth
1
spinal cord
Project
463
AMP
Genome assembly (visualization)
341
hg19
8
GRCh38
BIOSAMPLE
TYPE
463 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
histone modifications
binding sites
accessible chromatin
chromatin state
target gene predictions
variant allelic effects
primary cell
epithelial cell of proximal tubule
1
14
common myeloid progenitor, CD34-positive
14
glomerular endothelial cell
1
12
foreskin fibroblast
5
2
2
mammary epithelial cell
3
3
3
CD4-positive, alpha-beta T cell
8
CD8-positive, alpha-beta T cell
7
endothelial cell
4
1
2
foreskin keratinocyte
7
kidney loop of Henle thin ascending limb epithelial cell
7
osteoblast
1
1
2
2
1
kidney interstitial cell
6
peripheral blood mononuclear cell
4
1
1
B cell
5
CD4-positive, alpha-beta memory T cell
5
bronchial epithelial cell
2
1
2
endothelial cell of umbilical vein
4
1
glomerular visceral epithelial cell
1
4
hepatocyte
3
1
1
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
natural killer cell
3
1
1
CD14-positive monocyte
4
T-cell
4
dermis blood vessel endothelial cell
4
keratinocyte
1
2
1
mesangial cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
nephron progenitor
4
neurosphere
4
pancreatic ductal cell
2
1
1
regulatory T cell
2
1
1
skeletal muscle myoblast
2
1
1
tracheal epithelial cell
2
2
trophoblast cell
3
1
CD1c-positive myeloid dendritic cell
1
1
1
S-shaped body
3
T-helper 1 cell
3
adult endothelial progenitor cell
3
cardiac fibroblast
3
fibroblast of lung
3
fibroblast of mammary gland
1
1
1
fibroblast of pulmonary artery
1
1
1
fibroblast of villous mesenchyme
1
1
1
foreskin melanocyte
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
meso-epithelial cell
1
1
1
monocyte
2
1
mononuclear cell of bone marrow
1
2
pancreatic alpha cell
1
1
1
pancreatic beta cell
2
1
plasma cell
1
1
1
pre-B acute lymphoblastic leukemia cell
2
1
preadipocyte
2
1
pulmonary artery endothelial cell
1
1
1
retinal pigment epithelial cell
1
1
1
Adipose stromal cell
1
1
CD34-positive, CD38-negative hematopoietic stem cell
1
1
Ishikawa
1
1
Kupffer cell
2
Rhabdoid Tumor of the Kidney
1
1
T-helper 17 cell
2
T-helper 2 cell
2
Th1 cell
1
1
Th17 cell
1
1
acute myeloid leukemia cell
2
aortic adventitial fibroblast
1
1
astrocyte
1
1
cardiac muscle cell
2
cardiac muscle myoblast
1
1
chronic lymphocytic leukemia cell
1
1
columnar chondrocyte
1
1
dermis microvascular lymphatic vessel endothelial cell
2
epithelial cell of prostate
2
erythroid cell
1
1
erythroid progenitor cell
1
1
fibroblast of breast
2
gamma-delta T cell
2
head and neck squamous cell carcinoma
1
1
hepatic stellate cell
1
1
kidney inner medulla collecting duct intercalated cell
2
leukemic stem cell
1
1
lung microvascular endothelial cell
2
mantle cell lymphoma cell
2
mast cell
1
1
mature neutrophil
1
1
mesenchymal stem cell
1
1
mononuclear cell
1
1
myoepithelial cell of mammary gland
2
myotube
1
1
neoplastic cell
1
1
neuronal stem cell
1
1
neutrophil
2
peripheral blood stem cell
1
1
peripheral blood-derived erythroblast
2
prostate gland cancer cell
1
1
pulmonary interstitial fibroblast
1
1
renal epithelial cell
1
1
renal proximal tubule cell
1
1
renal vesicle
2
skeletal muscle satellite cell
1
1
small cell ovarian carcinoma cell
1
1
somatic muscle myotube
1
1
vascular associated smooth muscle cell
2
B-cell lymphoma cell
1
B-lymphocyte
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta memory T cell
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th2 cell
1
acute myeloid leukemia
1
alpha-beta T cell
1
alveolar cell type II
1
amniotic epithelial cell
1
aortic endothelial cell
1
aortic smooth muscle cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bone cell
1
bone marrow cell
1
brain microvascular endothelial cell
1
brain pericyte
1
cholangiocyte
1
choroid plexus epithelial cell
1
colorectal cancer
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell of coronary artery
1
epithelial cell of distal tubule
1
epithelial cell of esophagus
1
erythroid lineage cell
1
fibroblast of dermis
1
fibroblast of gingiva
1
fibroblast of peridontal ligament
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
granulocyte
1
head and neck neoplasia
1
induced T-regulatory cell
1
intestinal epithelial cell
1
iris pigment epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
leukocyte
1
mammary gland epithelial cell
1
mature B cell
1
meningioma cell
1
mycosis fungoides
1
myeloid leukocyte
1
myofibroblast cell
1
neural progenitor cell
1
neutrophil progenitor cell
1
non-pigmented ciliary epithelial cell
1
pancreatic acinar cell
1
pancreatic endocrine cell
1
peripheral blood
1
primordial germ cell
1
proximal tubule
1
renal connecting tubule
1
renal cortical epithelial cell
1
seminoma cell
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
sperm
1
stromal cell of bone marrow
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
ureteric bud
1
urinary bladder cancer cell
1
See all biosamples
Download