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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
327
candidate regulatory elements
163
target gene predictions
160
chromatin state
122
gene expression
93
histone modifications
71
binding sites
6
accessible chromatin
1
variant allelic effects
Date released
487
September, 2022
456
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
661
bed bed3+
160
bed bed9
122
tsv
83
txt
7
bigWig
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
943
Homo sapiens
Biosample type
2018
tissue
1846
cell line
943
primary cell
294
in vitro differentiated cells
Organ
297
epithelium
131
connective tissue
120
kidney
79
skin of body
73
vasculature
50
blood vessel
37
penis
33
mammary gland
32
extraembryonic component
17
artery
17
brain
17
embryo
17
lung
15
heart
15
musculature of body
14
eye
13
liver
11
bronchus
11
pancreas
11
vein
9
bone element
8
blood
8
bodily fluid
8
bone marrow
8
lymphatic vessel
8
prostate gland
6
placenta
4
esophagus
4
mouth
4
spinal cord
4
trachea
2
uterus
1
intestine
Project
943
AMP
Genome assembly (visualization)
821
hg19
162
GRCh38
BIOSAMPLE
TYPE
943 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
gene expression
histone modifications
binding sites
accessible chromatin
variant allelic effects
primary cell
common myeloid progenitor, CD34-positive
27
13
13
CD4-positive, alpha-beta memory T cell
14
9
9
B cell
13
8
8
CD8-positive, alpha-beta memory T cell
8
7
7
mononuclear cell
7
6
6
1
foreskin keratinocyte
11
4
4
epithelial cell of proximal tubule
2
1
1
14
CD14-positive monocyte
8
4
4
glomerular endothelial cell
2
1
1
12
trophoblast cell
7
4
4
1
natural killer cell
6
3
3
1
1
neurosphere
7
3
3
regulatory T cell
5
3
3
1
1
T cell
4
4
4
T-helper 1 cell
6
3
3
fibroblast of lung
6
3
3
foreskin fibroblast
6
1
1
2
2
T-helper 17 cell
5
3
3
T-helper 2 cell
5
3
3
bronchial epithelial cell
4
2
2
1
2
endothelial cell of umbilical vein
6
2
2
1
dermis blood vessel endothelial cell
6
2
2
fibroblast of dermis
4
3
3
keratinocyte
3
2
2
2
1
mammary gland epithelial cell
3
3
3
1
osteoblast
2
1
1
1
2
2
1
skeletal muscle myoblast
4
2
2
1
1
fibroblast of cardiac tissue
3
3
3
mammary epithelial cell
3
3
3
naive T cell
3
3
3
CD4-positive, alpha-beta T cell
8
epithelial cell of prostate
4
2
2
fibroblast of breast
4
2
2
glomerular visceral epithelial cell
2
1
1
4
hepatocyte
1
1
1
3
1
1
myoepithelial cell of mammary gland
4
2
2
neutrophil
4
2
2
CD8-positive, alpha-beta T cell
7
endothelial cell
4
1
2
kidney loop of Henle thin ascending limb epithelial cell
7
kidney tubule cell
3
2
2
CD1c-positive myeloid dendritic cell
2
1
1
1
1
dermis lymphatic vessel endothelial cell
2
2
2
fibroblast of mammary gland
2
1
1
1
1
fibroblast of pulmonary artery
2
1
1
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
foreskin melanocyte
4
1
1
kidney interstitial cell
6
peripheral blood mononuclear cell
4
1
1
pulmonary artery endothelial cell
2
1
1
1
1
retinal pigment epithelial cell
2
1
1
1
1
skin fibroblast
2
2
2
astrocyte
2
1
1
1
hepatic stellate cell
1
1
1
1
1
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
lung microvascular endothelial cell
3
1
1
T-cell
4
aortic endothelial cell
1
1
2
astrocyte of the cerebellum
2
1
1
astrocyte of the hippocampus
2
1
1
astrocyte of the spinal cord
2
1
1
brain microvascular endothelial cell
2
1
1
choroid plexus epithelial cell
2
1
1
epithelial cell of esophagus
2
1
1
fibroblast of gingiva
2
1
1
fibroblast of peridontal ligament
2
1
1
fibroblast of the aortic adventitia
2
1
1
fibroblast of the conjunctiva
2
1
1
iris pigment epithelial cell
2
1
1
kidney epithelial cell
2
1
1
kidney glomerular epithelial cell
2
1
1
mesangial cell
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
nephron progenitor
4
non-pigmented ciliary epithelial cell
2
1
1
renal cortical epithelial cell
2
1
1
skeletal muscle cell
2
1
1
skeletal muscle satellite cell
2
1
1
smooth muscle cell of the brain vasculature
2
1
1
stromal cell of bone marrow
2
1
1
tracheal epithelial cell
2
2
S-shaped body
3
adult endothelial progenitor cell
3
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
cardiac fibroblast
3
epidermal melanocyte
1
1
1
epithelial cell of amnion
1
1
1
kidney capillary endothelial cell
1
1
1
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
luminal epithelial cell of mammary gland
1
1
1
mammary stem cell
1
1
1
meso-epithelial cell
1
1
1
monocyte
2
1
mononuclear cell of bone marrow
1
2
pancreatic alpha cell
1
1
1
pancreatic ductal cell
2
1
pericyte cell
1
1
1
plasma cell
1
1
1
pre-B acute lymphoblastic leukemia cell
2
1
preadipocyte
2
1
regular cardiac myocyte
1
1
1
Adipose stromal cell
1
1
CD34-positive, CD38-negative hematopoietic stem cell
1
1
Ishikawa
1
1
Kupffer cell
2
Rhabdoid Tumor of the Kidney
1
1
Th1 cell
1
1
Th17 cell
1
1
acute myeloid leukemia cell
2
aortic adventitial fibroblast
1
1
cardiac muscle cell
2
cardiac muscle myoblast
1
1
chronic lymphocytic leukemia cell
1
1
columnar chondrocyte
1
1
dermis microvascular lymphatic vessel endothelial cell
2
erythroid cell
1
1
erythroid progenitor cell
1
1
gamma-delta T cell
2
head and neck squamous cell carcinoma
1
1
kidney inner medulla collecting duct intercalated cell
2
leukemic stem cell
1
1
mantle cell lymphoma cell
2
mast cell
1
1
mature neutrophil
1
1
myotube
1
1
neoplastic cell
1
1
neuronal stem cell
1
1
pancreatic beta cell
1
1
pancreatic delta cell
1
1
peripheral blood stem cell
1
1
peripheral blood-derived erythroblast
2
prostate gland cancer cell
1
1
pulmonary interstitial fibroblast
1
1
renal epithelial cell
1
1
renal proximal tubule cell
1
1
renal vesicle
2
small cell ovarian carcinoma cell
1
1
somatic muscle myotube
1
1
vascular associated smooth muscle cell
2
B-cell lymphoma cell
1
B-lymphocyte
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th2 cell
1
acute myeloid leukemia
1
alpha-beta T cell
1
alveolar cell type II
1
amniotic epithelial cell
1
aortic smooth muscle cell
1
bone cell
1
bone marrow cell
1
brain pericyte
1
cholangiocyte
1
colorectal cancer
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell of coronary artery
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
granulocyte
1
head and neck neoplasia
1
induced T-regulatory cell
1
intestinal epithelial cell
1
leukocyte
1
mature B cell
1
meningioma cell
1
mesenchymal stem cell
1
mycosis fungoides
1
myeloid leukocyte
1
myofibroblast cell
1
neural progenitor cell
1
neutrophil progenitor cell
1
pancreatic endocrine cell
1
peripheral blood
1
primordial germ cell
1
proximal tubule
1
renal connecting tubule
1
seminoma cell
1
sperm
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
ureteric bud
1
urinary bladder cancer cell
1
See all biosamples
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