Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
815
candidate regulatory elements
815
histone modifications
691
binding sites
177
gene expression
80
variant allelic effects
65
accessible chromatin
20
target gene predictions
3
chromatin state
3
eQTL
1
other
1
representative DNase hypersensitivity sites
Date released
2516
February, 2021
2436
September, 2022
385
May, 2021
350
February, 2024
333
November, 2021
286
September, 2023
277
June, 2020
155
May, 2020
128
March, 2020
125
August, 2021
106
January, 2022
89
January, 2020
82
October, 2022
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
33
August, 2017
32
February, 2023
29
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
2470
bed bed3+
178
tsv
83
txt
67
bigWig
3
bed bed9
3
bigBed bed9
3
bigBed narrowPeak
Organism
2625
Homo sapiens
Biosample type
1240
cell line
701
tissue
534
primary cell
196
in vitro differentiated cells
Organ
211
epithelium
207
kidney
129
brain
119
connective tissue
97
musculature of body
bodily fluid
71
intestine
70
blood
70
lung
68
limb
68
skin of body
64
vasculature
59
heart
53
embryo
47
blood vessel
46
large intestine
37
bone element
37
pancreas
33
extraembryonic component
29
liver
29
prostate gland
29
stomach
28
mammary gland
28
penis
27
lymph node
26
adipose tissue
21
ureter
20
artery
19
eye
18
placenta
18
small intestine
14
adrenal gland
12
gonad
12
thymus
10
esophagus
10
spleen
10
uterus
9
skeleton
9
spinal cord
9
vein
8
testis
6
bone marrow
6
nerve
5
bronchus
5
lymphatic vessel
5
lymphoid tissue
4
mouth
4
ovary
4
thyroid gland
4
trachea
3
breast
2
tongue
2
vagina
1
pituitary gland
1
urinary bladder
Project
2671
AMP
Genome assembly (visualization)
2476
hg19
22
GRCh38
organ_slims!
bodily fluid
BIOSAMPLE
TYPE
2671 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
histone modifications
binding sites
gene expression
variant allelic effects
accessible chromatin
target gene predictions
chromatin state
eQTL
other
representative DNase hypersensitivity sites
cell line
breast cancer cell
11
9
neuroblastoma cell
8
4
gastric cancer cell
9
2
Rhabdomyosarcoma
8
1
liposarcoma
6
3
+ See 678 more…
tissue
kidney
15
2
1
7
1
heart
18
1
1
1
2
1
stomach
21
1
brain
13
3
1
1
muscle of arm
17
1
+ See 186 more…
primary cell
epithelial cell of proximal tubule
1
14
1
common myeloid progenitor, CD34-positive
14
glomerular endothelial cell
1
12
1
CD4-positive, alpha-beta T cell
8
2
CD8-positive, alpha-beta T cell
7
2
1
+ See 201 more…
in vitro differentiated cells
cardiomyocytes
11
hematopoietic multipotent progenitor cell
9
1
1
induced pluripotent stem cell
9
T-cell acute lymphoblastic leukemia
5
3
neuroblastoma cell line
6
2
+ See 83 more…
See all biosamples
Download