Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
954
histone modifications
835
candidate regulatory elements
718
binding sites
267
gene expression
142
target gene predictions
106
eQTL
41
accessible chromatin
5
chromatin state
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
1
variant allelic effects
Date released
2588
February, 2021
2505
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
105
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
29
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
2697
bed bed3+
266
tsv
83
txt
31
bigWig
5
bed bed9
5
bigBed bed9
3
bigBed narrowPeak
Organism
3082
Homo sapiens
Biosample type
1377
cell line
749
primary cell
725
tissue
231
in vitro differentiated cells
Organ
230
epithelium
189
kidney
139
brain
131
connective tissue
99
musculature of body
80
intestine
78
bodily fluid
76
skin of body
75
lung
74
blood
68
pancreas
63
limb
60
embryo
55
heart
55
vasculature
53
large intestine
42
blood vessel
37
extraembryonic component
36
bone element
32
prostate gland
32
stomach
30
liver
30
mammary gland
29
adipose tissue
29
penis
28
lymph node
20
artery
20
placenta
20
small intestine
18
ureter
17
adrenal gland
17
eye
16
gonad
13
esophagus
13
uterus
12
pituitary gland
12
spleen
12
thymus
11
spinal cord
10
testis
9
skeleton
8
vein
6
ovary
6
thyroid gland
5
bone marrow
5
breast
5
bronchus
5
lymphatic vessel
5
lymphoid tissue
5
mouth
4
nerve
4
trachea
vagina
2
tongue
1
urinary bladder
Project
3082
AMP
Genome assembly (visualization)
2713
hg19
212
GRCh38
organ_slims!
vagina
BIOSAMPLE
TYPE
3082 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
accessible chromatin
chromatin state
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
variant allelic effects
cell line
breast cancer cell
11
9
EndoC_BH1
1
1
8
7
neuroblastoma cell
8
4
gastric cancer cell
9
2
lymphoblastoid cell line
3
2
6
+ See 710 more…
primary cell
monocyte
86
1
15
4
13
2
1
1
CD8-positive, alpha-beta T cell
30
7
2
2
CD14-positive monocyte
4
15
common myeloid progenitor, CD34-positive
14
1
epithelial cell of proximal tubule
1
14
+ See 219 more…
tissue
kidney
2
15
1
7
stomach
1
21
2
1
heart
1
18
1
1
brain
3
13
1
2
lung
17
1
+ See 189 more…
in vitro differentiated cells
embryonic stem cell
1
1
5
5
hematopoietic multipotent progenitor cell
1
9
1
1
cardiomyocytes
11
adipocyte
1
2
1
1
4
induced pluripotent stem cell
9
+ See 93 more…
See all biosamples
Download