Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
947
histone modifications
811
candidate regulatory elements
707
binding sites
263
gene expression
253
accessible chromatin
248
target gene predictions
6
eQTL
5
chromatin state
5
hQTL
3
meQTL
3
sQTL
1
other
1
representative DNase hypersensitivity sites
1
variant allelic effects
Date released
2541
February, 2021
2436
September, 2022
386
May, 2021
361
February, 2024
327
November, 2021
283
June, 2020
251
September, 2023
140
May, 2020
127
August, 2021
116
March, 2020
103
January, 2022
97
October, 2022
73
January, 2020
66
March, 2023
59
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
34
August, 2017
29
March, 2024
28
February, 2023
16
April, 2020
12
October, 2019
11
November, 2019
9
August, 2018
8
April, 2019
8
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
2973
bed bed3+
262
tsv
243
bigWig
81
txt
5
bed bed9
5
bigBed bed9
3
bigBed narrowPeak
Organism
3254
Homo sapiens
Biosample type
1357
cell line
1009
primary cell
661
tissue
227
in vitro differentiated cells
Organ
357
epithelium
191
kidney
175
connective tissue
121
brain
109
musculature of body
96
intestine
83
lung
83
skin of body
82
pancreas
78
bodily fluid
74
blood
62
embryo
62
heart
61
limb
vasculature
57
large intestine
42
blood vessel
40
stomach
39
extraembryonic component
37
bone element
36
mammary gland
34
liver
31
prostate gland
29
penis
28
lymph node
26
adipose tissue
26
adrenal gland
23
small intestine
21
eye
21
placenta
18
ureter
17
artery
15
gonad
14
esophagus
14
uterus
13
thymus
11
pituitary gland
11
spleen
10
spinal cord
9
skeleton
8
lymphatic vessel
8
testis
8
vein
7
bronchus
7
ovary
7
thyroid gland
6
bone marrow
5
lymphoid tissue
4
breast
4
mouth
4
trachea
3
nerve
2
tongue
2
vagina
1
urinary bladder
Project
2927
AMP
327
ENCODE
Genome assembly (visualization)
2989
hg19
434
GRCh38
organ_slims!
vasculature
BIOSAMPLE
TYPE
3254 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
accessible chromatin
target gene predictions
eQTL
chromatin state
hQTL
meQTL
sQTL
other
representative DNase hypersensitivity sites
variant allelic effects
cell line
breast cancer cell
11
9
EndoC_BH1
1
1
8
7
neuroblastoma cell
8
4
gastric cancer cell
9
2
pituitary stalk
10
+ See 705 more…
primary cell
monocyte
86
1
15
13
1
2
1
1
CD8-positive, alpha-beta T cell
30
7
2
1
3
endothelial cell
1
2
5
10
6
CD14-positive monocyte
4
15
fibroblast
14
4
+ See 280 more…
tissue
kidney
2
15
1
7
stomach
1
21
2
heart
1
18
1
1
brain
3
13
1
lung
17
+ See 174 more…
in vitro differentiated cells
embryonic stem cell
1
1
5
5
hematopoietic multipotent progenitor cell
1
9
1
1
cardiomyocytes
11
adipocyte
1
2
1
1
4
induced pluripotent stem cell
9
+ See 89 more…
See all biosamples
Download