Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
840
histone modifications
837
candidate regulatory elements
718
binding sites
314
accessible chromatin
177
gene expression
34
chromatin state
3
eQTL
2
target gene predictions
1
caQTL
1
representative DNase hypersensitivity sites
1
variant allelic effects
Date released
2590
February, 2021
2511
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
2712
bed bed3+
178
tsv
83
txt
34
bed bed9+
21
bigWig
3
bigBed narrowPeak
Organism
2928
Homo sapiens
Biosample type
1463
cell line
706
tissue
549
primary cell
210
in vitro differentiated cells
Organ
223
epithelium
203
kidney
132
connective tissue
131
brain
101
musculature of body
86
bodily fluid
82
blood
81
intestine
76
lung
76
skin of body
64
limb
63
embryo
55
vasculature
53
heart
53
large intestine
42
bone element
40
blood vessel
39
extraembryonic component
35
lymph node
35
pancreas
34
prostate gland
33
liver
32
mammary gland
32
stomach
31
penis
24
adipose tissue
23
eye
20
placenta
19
small intestine
19
ureter
18
artery
16
gonad
15
adrenal gland
12
esophagus
12
thymus
12
uterus
11
spinal cord
11
spleen
10
testis
9
skeleton
8
vein
7
lymphoid tissue
6
bone marrow
6
bronchus
6
lymphatic vessel
5
mouth
5
ovary
5
thyroid gland
5
trachea
4
breast
4
nerve
3
tongue
2
urinary bladder
2
vagina
1
nose
1
pituitary gland
Project
2928
AMP
Genome assembly (visualization)
2749
hg19
17
GRCh38
BIOSAMPLE
TYPE
2928 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
accessible chromatin
gene expression
chromatin state
eQTL
target gene predictions
caQTL
representative DNase hypersensitivity sites
variant allelic effects
cell line
breast cancer cell
11
9
neuroblastoma cell
8
4
gastric cancer cell
9
2
Rhabdomyosarcoma
8
1
1
MCF-7
2
4
2
1
+ See 727 more…
tissue
kidney
2
15
1
1
7
stomach
1
21
3
heart
1
18
1
2
1
brain
3
13
1
1
lung
17
+ See 186 more…
primary cell
epithelial cell of proximal tubule
1
14
common myeloid progenitor, CD34-positive
14
glomerular endothelial cell
1
1
12
CD4-positive, alpha-beta T cell
8
3
foreskin fibroblast
2
5
2
1
+ See 194 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
1
9
1
1
cardiomyocytes
11
induced pluripotent stem cell
9
T-cell acute lymphoblastic leukemia
5
3
neuroblastoma cell line
6
2
+ See 85 more…
See all biosamples
Download