Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
343
accessible chromatin
167
target gene predictions
114
histone modifications
90
gene expression
5
chromatin state
5
hQTL
3
eQTL
3
meQTL
3
sQTL
1
other
Date released
2590
February, 2021
2511
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
629
bed bed3+
88
tsv
41
bigWig
5
bed bed9
5
bigBed bed9
Organism
734
Homo sapiens
Biosample type
365
primary cell
215
cell line
94
tissue
60
in vitro differentiated cells
Organ
79
epithelium
57
pancreas
38
connective tissue
32
brain
17
embryo
16
blood
16
bodily fluid
16
intestine
15
kidney
13
skin of body
12
large intestine
12
musculature of body
10
lung
10
pituitary gland
9
extraembryonic component
9
heart
9
limb
9
lymph node
9
vasculature
8
liver
7
blood vessel
7
bone element
7
prostate gland
6
eye
6
mammary gland
5
artery
5
gonad
5
stomach
4
adipose tissue
4
penis
4
uterus
3
adrenal gland
3
placenta
3
spinal cord
2
bone marrow
2
breast
2
esophagus
2
lymphoid tissue
2
ovary
2
small intestine
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
bronchus
1
lymphatic vessel
1
mouth
1
nerve
1
nose
1
tongue
1
trachea
1
ureter
1
urinary bladder
Project
678
AMP
56
T1D
Genome assembly (visualization)
642
hg19
97
GRCh38
BIOSAMPLE
TYPE
734 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
histone modifications
gene expression
chromatin state
hQTL
eQTL
meQTL
sQTL
other
primary cell
monocyte
16
1
84
15
2
1
1
1
CD8-positive, alpha-beta T cell
1
3
30
2
CD14-positive monocyte
15
naive thymus-derived CD4-positive, alpha-beta T cell
1
1
1
1
1
1
1
regulatory T cell
3
1
2
+ See 106 more…
cell line
EndoC_BH1
7
8
pituitary stalk
10
Jurkat
1
2
U937
1
2
A549
1
1
+ See 158 more…
tissue
stomach
3
2
islet of Langerhans
2
2
adrenal gland
1
2
pancreas
2
1
breast epithelium
1
1
+ See 61 more…
in vitro differentiated cells
embryonic stem cell
5
5
dendritic cell
6
adipocyte
1
4
B cell
2
bipolar neuron
1
1
+ See 31 more…
See all biosamples
Download